| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3149 |
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| Symbol | |
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| ID | 3962545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3485493 |
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| End bp | 3487712 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917968 |
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| Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
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| Protein accession | YP_524389 |
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| Protein GI | 89901918 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGACT TGCCCAGCCC GGCAGCAGTC AACGCGGCCG CGGCCAGTTT TGCCGGCCTG
ACGGCCAAAC TCGACTACCT GTCAGCCTCG GATCTGGCGC AGGTGCGCCT GGCCTACCGC
TATGCCGACC AAGCCCATTT GGGACAACTG CGCAACAGCG GTGAACCCTA CATCACCCAC
CCGATTGCCG TCGCCGCCCA ATGCGCCGAC TGGAAGCTCG ATGCCCAGGC ACTGATGGCG
GCGCTGCTGC ATGATGCGCT GGAGGATTGC TGCGTCACCA AAATTGAGCT GATCGAGCGC
TTTGGCTCGC CCGTGGCCGA GCTGGTGGAC GGTCTGACCA AGCTCGACAA GCTGCATTTC
AGTACCCGCG AAGAAAACCA GGCCGAGTCG TTTCGCAAAA TGCTGCTGGC CATGGCGCGC
GACGTGCGCG TCATCCTGAT CAAGTTGGCG GATCGAACCC ACAACATGCG CACGCTGTCA
GACGCTCCGC GCGATAAGTG GGCCCGAATT GCCACCGAGA CGCTCGACAT CTACGCCCCG
ATTGCGCATC GCCTGGGTCT GAACCAGACC TACCGTGAAC TCCAGAACCT GGCGTTTCGC
TATTTGCGGC CCTGGCGTTA CGCCATTTTG TCCAAGGCGG TGGCCAAATC GCGCGGTCGT
CGACGCGATC TGATTCAAAA AGTACAGGAA GAAGTCGACA CCGCCTTCGC CAACAGTGGC
ATGGATGTGC GCATCGCCGG TCGCGAGAAA ACCTTGTATT CGATCTACAA GAAGATGGAG
GAGAAGCACC TCACATTTGC CCAGGTCACG GACATCTATG GCTTCCGGAT TCTGGTGCCC
AGCGTGATTG ACTGCTACAC CGCGCTGGGC ACCTTGCACC AGCTCTACAA ACCGGTGCCC
GGCAAGTTCA AGGACCACAT TGCCATTGGC AAGCTCAATG GCTACCAGTC GCTGCACACC
ACCTTGGTCG GCCCGTCCGG GGTGAATGTG GAGTTTCAGA TACGCACCGA GGCCATGCAC
CTGGTCGCCG AGTCAGGGGT TGCCGCGCAC TGGTTGTACA AAGTCAACAC CCCGCAAGGC
ACCGGCACCG GCGACTGGCT GGGCTCCAAG TGGCTGCAGT CGCTGCTTGA CATCGAAGAT
GAAACACGCG ATGCCGCCGA GTTTTGGGAT CACGTCAAGG TTGACCTGTT CCCGGATGCG
GTCTATGTCT TTACGCCCAA AAGCCAGATC ATGGCACTGC CCAAAGGGGC CACGGTGGTG
GACTTTGCCT ACGCGATTCA CAGCAATGTC GGCGACCGCA CGCTGGCGGC GCGGATCAAC
GGCGAACAAG TACCCTTGCG CACCGAGATC AAAAATGGCG ACGTCATTGA AATTGTCACC
GCGCCGGGCG CCGCCCCCAA TCCGGCCTGG CTCGGGTTTG TCCGCACTGC GCGCGCCCGC
TCAAAAATTC GCCAGCACCT CAAGACGCTG GCCCAGACCG AGTCTGAGGA CCTGGGCGAA
AAGATGTTGG CGCAGGCGCT GCGCGCCGAA GGCATTGAAA AATTGCCGGA CGACACCGGC
AGCAATCGGT TGCTGTGGGA GAAGTTACTG CGTTTTACCG GCAACAAGAG CATGTCCGAA
CTGTTCCTGG ACCTTGGCTT GGGCAAACGC ATTGCCAGCA TCGTTGCCAA GCGTTTGCTG
ACCTTGCTGA CCGACCGGGG CGAAAAGCCG GACGCCTTGT TGCTCACGCG CGAGCGCTAC
ACCACGAACG AGGCGGTAGC ACAAGGCGGC GTCGTGCTCG ATGGCAGCGA AAACGCCTCC
ATCCGTTTCG CGCCGTGTTG CGGACCGGTG CCGGGCGACG CCATTGTGGG TTACCTGGGA
CGCGGCGAGG GTTTGCTGGT GCATGCAGCG GACTGCGCGG TAGCCCAAAA GCTCAAACTC
AATGACAGTG AGCGCTTTAT TGACGTGCAG TGGTCGGACG ACCCGGTTCG CCCCTTTGAA
ACCGAGGTGC GGGTGACGGT CGTCAATGGC CGCGGCGTGT TGGCCCGGGT CGCTGCCGCC
CTCGCCGCTG CCGAGGTCGA CATCACGCAC ATTGACATGG AAGATGAAGC CGCGCAGGAC
GCCACTGACT TGCGTTTTGT GATTGCCGTG CGTGACAGCA AACAGCTTGA AACCGCCTTG
GGCAATCTCA GAAGAACACA TGCCGTGCTC AAAGCGCAAC GGTCCAAAGT CACCCAATAG
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| Protein sequence | MADLPSPAAV NAAAASFAGL TAKLDYLSAS DLAQVRLAYR YADQAHLGQL RNSGEPYITH
PIAVAAQCAD WKLDAQALMA ALLHDALEDC CVTKIELIER FGSPVAELVD GLTKLDKLHF
STREENQAES FRKMLLAMAR DVRVILIKLA DRTHNMRTLS DAPRDKWARI ATETLDIYAP
IAHRLGLNQT YRELQNLAFR YLRPWRYAIL SKAVAKSRGR RRDLIQKVQE EVDTAFANSG
MDVRIAGREK TLYSIYKKME EKHLTFAQVT DIYGFRILVP SVIDCYTALG TLHQLYKPVP
GKFKDHIAIG KLNGYQSLHT TLVGPSGVNV EFQIRTEAMH LVAESGVAAH WLYKVNTPQG
TGTGDWLGSK WLQSLLDIED ETRDAAEFWD HVKVDLFPDA VYVFTPKSQI MALPKGATVV
DFAYAIHSNV GDRTLAARIN GEQVPLRTEI KNGDVIEIVT APGAAPNPAW LGFVRTARAR
SKIRQHLKTL AQTESEDLGE KMLAQALRAE GIEKLPDDTG SNRLLWEKLL RFTGNKSMSE
LFLDLGLGKR IASIVAKRLL TLLTDRGEKP DALLLTRERY TTNEAVAQGG VVLDGSENAS
IRFAPCCGPV PGDAIVGYLG RGEGLLVHAA DCAVAQKLKL NDSERFIDVQ WSDDPVRPFE
TEVRVTVVNG RGVLARVAAA LAAAEVDITH IDMEDEAAQD ATDLRFVIAV RDSKQLETAL
GNLRRTHAVL KAQRSKVTQ
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