Gene Rfer_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3146 
Symbol 
ID3962542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3483797 
End bp3484279 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content61% 
IMG OID637917965 
Productcupin 2 protein 
Protein accessionYP_524386 
Protein GI89901915 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAACA CTGAATTCCC CATCGCCATC GCTGCCCTGG ATGCAGCACC CCGCACAAAA 
CCTTCAACTT ATCCCGAACC GTTTGCCTCG CGCATGGCGG GCCGGGAGAA GCGACCGCTG
GGCGAGCTCT TCGGTTTATC CAATTTCGGC GTGAACCTGA CCCGTCTCAT ACCCGGTGCA
GGCTCTGCGC TTCGGCACGC CCACACGAGA CAGGACGAAT TCGTGTACAT CGTGGAGGGT
CACCCGGTGC TCATCACGGA CCAGGGCGAG ACGCCACTTG CTCCGGGCAT GTGCGCGGGT
TTCAAAGCCG GCACCGGCAA AGGCCACAAA GTCGTGAACC GCACAAACGC GGATGTTCTT
TATCTCGAAG TCGGCGACCG CACCGCCGGC GATGCCGCGA CCTACCCGGA TGACGACTTG
CAAGCCGCCT TGGGGGACGA CGGGAAATGG CGGTACGCCC ACAAGGATGG AACACCGTAT
TGA
 
Protein sequence
MPNTEFPIAI AALDAAPRTK PSTYPEPFAS RMAGREKRPL GELFGLSNFG VNLTRLIPGA 
GSALRHAHTR QDEFVYIVEG HPVLITDQGE TPLAPGMCAG FKAGTGKGHK VVNRTNADVL
YLEVGDRTAG DAATYPDDDL QAALGDDGKW RYAHKDGTPY