Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3088 |
Symbol | |
ID | 3963284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3424858 |
End bp | 3426168 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637917908 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_524329 |
Protein GI | 89901858 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.417051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACGTA TTTTGCTGAT TGAAGATGAT CCGATCATGG GCGAGTCGCT GGTGCAGCGA CTTGAACTCG AAGGCTTGCA GGTTCAGTGG TGCCACAGCC TGGGTCAGGC CCAGTTAGAG GTGACAAAGG ATCACGCTGC CATCATCAGC GATGTGCGGC TGCCTGATGG GCTGGCCACA GACTGGTTCG TGCAGTTGCC CGCGAGCATC CGTTCAGTGC CATGGTTTTT TCTCACCGGT TATGGCAGCG TCAACGATGC TGTGCTAGCG GTGAGGGGCG GCGCCAGGGA ATACCTGACC AAACCATTTG ATATTGAAAA ACTGCTTGAA TTGGTACAAA ACGCAGTGGC CAATCGACCA CTTCCAACGC CAGAAGTGGT GTTAGGTATT TCACCCGCCA TGCGTCGGGT GGAGGCCCTG GTGGTGAAAG TATCACAGCA AAAAGTTTCC GTTTTGCTCA ATGGGGAATC CGGTGTTGGC AAAGAGGTTG CCGCACAACT GATTCACCGG CTTGACCCGC GGCCTGACAA GGGTGAGTTT GTGGCAGTGA ACTGCGCTGC CATTCCAGAG ACCCTGTTGG AGGCAGAGTT CTTTGGCTAT GAAAAAGGGG CTTTTAGCGG TGCGGGACGA CAACATCGTG GCTATCTTGA ACGCGCTGAT CACGGCACAC TTTTTTTGGA TGAAGTGGGG GACTTGCCAG CCAACATGCA AGCCAAATTG TTGCGTGCGC TGCAGGAAAA ATGTTTTTTT AGGCTCGGCT CCGAACGCAC CACACACAGC GACTTCCGCG TGGTGGCGGC CACTAACCGG GACCTCTATG CCGACATGAC GGCCGGTCGG TTTCGTGAAG ACCTGTTTTA CCGGCTCGCA GTCATCCGCA TCAATTTGCC GCCGCTTCGG GAGCGACCCG AAGATATTCG CTGGCTAACC GAACGTCTGC TGGCCACTAT GGTGATAGAA CAGAGCCGGC CACTGGCCAT GTCAGAAGTC TTTATGCGCG ACATCATGGG GCGCGACTGG CGTGGCAATG TGCGTGAGTT GCGCTCTTAC CTGGAACAGG CGGTCGTCAT GAGCGACGCA GGCATTCTGG ATGAACCGCT GCCCGACCAT CCGCACAACC GCGGCCCAAT CCCTGCGCCG CCGACGGAAG CCATCATTCC TTTGCAGGCC ATGGTGGAAG ACGCAGAGCG TGTGCACATC CGTAAGGCCT TGAACCGGTG CGAAGGCAGC GTCGGCAAGA CCGCAGAGTT GCTCGCCATC TCGCGCAAGA CATTGTGGGA AAAAATGAAA CGACTGGCGA TCAGCGCCTG A
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Protein sequence | MKRILLIEDD PIMGESLVQR LELEGLQVQW CHSLGQAQLE VTKDHAAIIS DVRLPDGLAT DWFVQLPASI RSVPWFFLTG YGSVNDAVLA VRGGAREYLT KPFDIEKLLE LVQNAVANRP LPTPEVVLGI SPAMRRVEAL VVKVSQQKVS VLLNGESGVG KEVAAQLIHR LDPRPDKGEF VAVNCAAIPE TLLEAEFFGY EKGAFSGAGR QHRGYLERAD HGTLFLDEVG DLPANMQAKL LRALQEKCFF RLGSERTTHS DFRVVAATNR DLYADMTAGR FREDLFYRLA VIRINLPPLR ERPEDIRWLT ERLLATMVIE QSRPLAMSEV FMRDIMGRDW RGNVRELRSY LEQAVVMSDA GILDEPLPDH PHNRGPIPAP PTEAIIPLQA MVEDAERVHI RKALNRCEGS VGKTAELLAI SRKTLWEKMK RLAISA
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