| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3083 |
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| Symbol | |
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| ID | 3963279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3416653 |
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| End bp | 3418278 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637917903 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_524324 |
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| Protein GI | 89901853 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.186488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACA TTGGTCTGAC CCAGCCAAAC CGAACTTCGC ATCGAATTCC ATGGCTTTTT
GGGCTGGGAT ACATACTTGT TTTTCTATTG CTCGACTGGG CGAGCTACAT ACGGCCTTTA
CAGGGTCTCA ATATCACGCC ATGGAATCCG CAACCGGCGG TTGCCGTCGC ATTGCTGCTA
TTGAATAGGC GGTGGCTGTG GATTGTCTGG GTAAGCCTGA TAACGGCTGA GTTGGTCGTG
CGCGGAAATC CAGCCGACTG GCTTGTAGTA TTGACATCAA CAGCCGCGCT CAGTCTGGTT
TACGCTGCCA TTGCCCATAG CTTGACAACT CGAATGGATC GCGCGCTGGC CTTGGCCACA
CAAAAAGATC TTTTGTGGTT CACTGGCATC GTCATGACGG GAGCACTGCT GAGCGGTGTG
GTCTACATCA CAGCATTCTC AGTGGCAGGT CTAGGGCCGA GTGGTCCAAC CTACGAGCCG
ATCGTTCGAT ATTGGATTGG CGACGCCGTG GGTCTAATCG TGCTGCTGCC AATGCTTCTC
GTTGTAATGG ATCCCCTACG TCGGGCCACA CTGCTCGAAA CGCTTAAAAG CCGTCAGTGG
TGGGCCGTCG CTGTTCTAAC GTGCTTGCTC CTTTGGGTCG TGTTTGGTCC AGGTGGGCAA
GACCATTTCA AATACTTCTA CTTACTGTTT GTGCCTGTTG TCTGGGCATC AGCCAAGCTG
GGGGTACCTG GGGCTGTGCT TGCCTCGGGC CTGACCCAGT TGGGACTGAT CTTCGCCGTG
CAATCGGTAC CCAACGAGGA CCTGACGGTG TTCGAGCTTC AGGTGCTGAT GGCCGCAGTT
ACCATGACAG GTTTACTTCT TGGCGTTGCC GTTGATGAAA GAACTCGCGC AGCCGCTGAA
CTTCGCGGCA GCTTGCGCAT GGCTGCGGCC GGCCAGATGG CGGCGGCGCT GGCCCATGAA
TTAAGTCAAC CCCTTACAGC ACTGAGCAAC TACGCCCAAG CCTGCCAAAT GCTCGTAACC
GACGCACCCG GCCTACAACC GGATCATCGT GACCAATTGG TCGAAGTTAT GCAACGGATG
GTTGACGATG CCAACCGTGC TGGTAATGTA ATCAAGCGTT TGCGCGACTT TTTCAGGACC
GGCTCCACAC ATCTGCACTT GATCTCACCA ACGGCCATCG TCAGAGAAGC AGTGCAAGTT
CACCTTCGCC GGGCCGACGC ACTGAAACTG CGTATGGAGA GCCAAATTCA GGACAACTTA
CCGATGGTAT GGATGGATCC TATCCAGATC GCCGTGGTCC TGCGCAATTT AGTCACGAAT
GCCATAGACT CTGCCGCAGC GACAAGTAGT GGCGACCTCG TGGTGATTCG GGCGTACGTC
ACCGATGGCG AGTTGCTGAT CGAAGTTAAA GACAATGGCC CCGGCGTCGG CACGGCTCGC
CTGCAAACCC TGTTTGAGGC CGGACCGTCG GACAAGCCGG GCGGCATGGG AGTTGGTTTG
AGCATCTGCC GCGCGATTGT TGAAGCCCAT GGGGGCAGAC TCTGGGCTGA ACCGGGCTCA
GAAGGCTGCT TCCGCTTTAC GCTGCCAGTG GAGAGCGAAA ACCATAGCGA AGTTAAAAAT
GCATAA
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| Protein sequence | MTNIGLTQPN RTSHRIPWLF GLGYILVFLL LDWASYIRPL QGLNITPWNP QPAVAVALLL
LNRRWLWIVW VSLITAELVV RGNPADWLVV LTSTAALSLV YAAIAHSLTT RMDRALALAT
QKDLLWFTGI VMTGALLSGV VYITAFSVAG LGPSGPTYEP IVRYWIGDAV GLIVLLPMLL
VVMDPLRRAT LLETLKSRQW WAVAVLTCLL LWVVFGPGGQ DHFKYFYLLF VPVVWASAKL
GVPGAVLASG LTQLGLIFAV QSVPNEDLTV FELQVLMAAV TMTGLLLGVA VDERTRAAAE
LRGSLRMAAA GQMAAALAHE LSQPLTALSN YAQACQMLVT DAPGLQPDHR DQLVEVMQRM
VDDANRAGNV IKRLRDFFRT GSTHLHLISP TAIVREAVQV HLRRADALKL RMESQIQDNL
PMVWMDPIQI AVVLRNLVTN AIDSAAATSS GDLVVIRAYV TDGELLIEVK DNGPGVGTAR
LQTLFEAGPS DKPGGMGVGL SICRAIVEAH GGRLWAEPGS EGCFRFTLPV ESENHSEVKN
A
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