| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3074 |
|---|
| Symbol | |
|---|
| ID | 3962638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 3402028 |
|---|
| End bp | 3403812 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637917894 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_524315 |
|---|
| Protein GI | 89901844 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTG CGATATTGGA ATTTCTTAGG GACTTGCAGG CAGACATCAG GTCGCAAGTC
GGCGACGACC TGCCGTATGA AGAGCAGGTG TTTTCCGATA TCGTCATGAA GCAGCTTGCG
GACGCAGGAA TGACTTACAA CGATCCGGTT GTGTGCCACT ACAAGGGGAA GGTCGGAAAT
GCCAATTTGA GGTTGAGCGG CTATTCGATT TCGGAGGACG AGGATCAACT TGACCTGTTC
GTCAGCCTCT ACGAGGGCGT GAACGAAATT GCCTACATAT CGGAAACGGA CACGAAGACT
GCCGTCGAGC AATGCCTGCG GTTCTTGACG CTCTGCGCCA ATGGCACCAT GGCTGCCAAA
CTAGAAGACT CGAGCGATGA ACGCGCCCTT GCCACCAAAC TGCAACAGAT TTACGACGGC
CTGGAGCAGA TTCGAGTCTT CGTCCTTACC GACAAGGTGG CGAAAACAAA AAACTTCAAA
CCGCGCGAGA TCAATGGCAA AACCGTCCGC CTTGAGGTCA TGGACACCGA GCGACTATTC
CGCCATGTTT CCGAAGGCAA GCCGCGCGAC GAACTGATCG TGAATTTCAA AGAGATTTGC
GGAGCCCCAT TGCCGTGCAT TTTCGTGCCT GGCGGTGATG AGGACTATGG ATACGCGTTG
GCAGCCATCC CCGCTGTCGC CTTGCAAGTT CTGTATGCGA AGTTCGACTC TCGGTTGCTT
GAGGCCAACG TCCGCTCGTT CCTGAGCGTC AAGGGCAAGG GCGTCAACGC GGGAATCCAA
CATACGCTGC GCCACGATCC CGGACGCTTC ATGGCCTACA ACAATGGCAT TGTCGTAGTG
GCCGATCAAG TCGCTCTGGT GAAGACTGAG GATGGCGGCA TGGGCATATC CATGATTCAG
GGCTTGCAAA TCGTCAACGG TGGACAGACG ACCGCATCCA TCTTCTTCAC CAAGCGGAAA
TTTCCTGAAA CCGACCTCAG CCGAGTGCGT GTCCCCGCAA AGATCATCGT CATGAAGGCT
CAAGATCCCG CGCAAGAAGA GACATTGATT TCGGACATTT CTCGGTTCGC GAACAGCCAG
AATTCCGTCA AACAATCCGA CCTTTCCGCC AACAAGCCCT ATCACGTTGC CATCGAAAAG
CTCTCTCGAA GCATCTACTG TCCGGATGGA GTGAGCCAAT GGTTTTATGA ACGCGCGGCG
GGAAGCTACA ACACATTGCT ATCCCTGTCG GGGAACACGC CTGCAAGGCT CAAAGCCCTC
AAGGAGTCGA TCCCCCCGGC GCGGCGCATC ACCAAGACCG ACTTGGCTAG ATACATCAAC
ACTTGGGATA TGAAACCCGA TGTCGTGAGT CTTGGCACGC AAAAGAATTT CGACCGTTTC
ATGGCCGAAA TCACCTCGTC CAACGGGCAA GAGGCGCCCG CCACAACGGT CGCCGAGTTC
AAGGCCATGG TGACAAAGGC GAAAATCTAC CGGGATACGC AGAAGCTGGT GCGCCCCATG
TTTTCAGCTT TTCAAGTCAA TGTCGCAACC TACACGATCT CCCTGCTCGC CCAAGAGCTT
GGGGAGCGGA TCGACTTGGA AAAAATTTGG AACAATCAGG CGCTGTCGCC AGAGTTGCTT
GGGCAAATCT CGGTCTGGGC AAGAGAAGTA AACGACGTGC TGCACGAAAG CGCGCAAAGC
CGCATGGTGT CGGAATGGGC AAAACGGCCT GAGTGCAAGG CCGCAGTGTT GGAGTCGCAC
TATTCCGCCC CAGCTGCCAA CATTCCCGAG GTGCGGGCGA AGTGA
|
|---|
| Protein sequence | MSIAILEFLR DLQADIRSQV GDDLPYEEQV FSDIVMKQLA DAGMTYNDPV VCHYKGKVGN
ANLRLSGYSI SEDEDQLDLF VSLYEGVNEI AYISETDTKT AVEQCLRFLT LCANGTMAAK
LEDSSDERAL ATKLQQIYDG LEQIRVFVLT DKVAKTKNFK PREINGKTVR LEVMDTERLF
RHVSEGKPRD ELIVNFKEIC GAPLPCIFVP GGDEDYGYAL AAIPAVALQV LYAKFDSRLL
EANVRSFLSV KGKGVNAGIQ HTLRHDPGRF MAYNNGIVVV ADQVALVKTE DGGMGISMIQ
GLQIVNGGQT TASIFFTKRK FPETDLSRVR VPAKIIVMKA QDPAQEETLI SDISRFANSQ
NSVKQSDLSA NKPYHVAIEK LSRSIYCPDG VSQWFYERAA GSYNTLLSLS GNTPARLKAL
KESIPPARRI TKTDLARYIN TWDMKPDVVS LGTQKNFDRF MAEITSSNGQ EAPATTVAEF
KAMVTKAKIY RDTQKLVRPM FSAFQVNVAT YTISLLAQEL GERIDLEKIW NNQALSPELL
GQISVWAREV NDVLHESAQS RMVSEWAKRP ECKAAVLESH YSAPAANIPE VRAK
|
|---|
| |