Gene Rfer_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3015 
Symbol 
ID3960360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp3325415 
End bp3326008 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content69% 
IMG OID637917835 
Productchorismate lyase 
Protein accessionYP_524257 
Protein GI89901786 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.651165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTCT GGAGCAAGCG CAATGTGCAG CGCGGCAACC GCAAACGCTG GGTCGGTGCG 
ACCGGCTCGC TCAGCGCGCG GCTGGCGGCT GCGGGCCAGC GTTTTAGCGT GCAGGTGCTC 
AGCCAGGGTC TGCAAGCGCT AGACCCCGAT GAGGCCAGCG CCCTGGGTCT GTCCAGACTC 
AAGGTCGGCT ATGTGCGCGA GGTGCTGTTG CGCGTGGACG AGGTCGCCGT GGTGTTTGCC 
CGCAGCGTCA CCGCACACCC GCACTCACAA GGGCCGTGGC GCTCCATCCG GGGCCTGGGC 
ACGCGGCCAC TGGCCGATGT GCTGTTCGGG CAACACGGCA TCGCGCGCAC GCCGCTGCAA 
TTTGCCAGTC TGCAAGTCGC CAGTTCGCTG CATCGCCATG TGGCACACGC CTGGCTGGGC 
GCTACCGGCG CAGCGCTGGC CAGCCGCGTG CTGCCCGCGC GGCGCTCGGT CTTCACGCGC 
GGCGCGGCAC CGCTGCTGGT GATGGAAGTG TTTGCAGCAC CACACGCGCC CTGGGGCTGG 
CTGACCACCA AGACACGCCG CGGGCCACCC GCATTACCAA GGACAAAACC ATGA
 
Protein sequence
MKVWSKRNVQ RGNRKRWVGA TGSLSARLAA AGQRFSVQVL SQGLQALDPD EASALGLSRL 
KVGYVREVLL RVDEVAVVFA RSVTAHPHSQ GPWRSIRGLG TRPLADVLFG QHGIARTPLQ 
FASLQVASSL HRHVAHAWLG ATGAALASRV LPARRSVFTR GAAPLLVMEV FAAPHAPWGW 
LTTKTRRGPP ALPRTKP