| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2919 |
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| Symbol | |
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| ID | 3960436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3230117 |
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| End bp | 3231154 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637917738 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_524161 |
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| Protein GI | 89901690 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.813091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGGTT TGGATATCAG TTCTTCCAGT GTAAAAATGG TCGAGTTGGG TCACGACAAA
GCTGGCAACC TGGTGCTAGA ACGTTGTGCG ATTGTGCCGC TTGAGCGCGG TTGGATAACT
GACGGCAACA TCGAAAAGTT CGATGAGGTG GCTGATGCCG TTCGCCGTCT GGTAAAAAAA
AGCGGGACCA AGACCAAAAA TGTCGCCATG GCCTTGCCGC CCTCAGCGGT CATCACCAAA
AAAATTACGC TGCCGGGTGG TATGTCCGAC CAGGAGTTGG AATTGCAGGT CGAGACCGAG
GCCAACCAAT ACATCCCGTT CCCACTGGAC GAAGTGAGCC TTGATTTTTG CATTGTTGGG
CCCAGTGCCA CTTCTGCCGG CGATGTGGAG GTTCTCATTG CCGCTTCACG CCGGGAAAAA
GTGCAGGATA TCCAGGGCCT GGCCGAAGCA GCTGGCTTAA AGCCGGTGAT CGTGGACGTG
GAATCTTATG CTTCGCGCCT GGCGACCAGT CGGCTGATAG AAAACCTTCC CCATAAAGGC
GTTGGCAGCA TCGTGGCCCT GTTTGAAGTG GGGGCGCAAA CCACCAGCAT GCAAGTCATT
CGCGATGATG AAGTCCTGTA CGACCGGGAT CAAGCGTTTG GTGGAGCCCA ACTCACCCAA
TTGATCGTGC GGCAGTATGG TTTTTCGTTG GAAGAAGCTG AGAGCAAAAA ACGAAGCGGT
GAACTGCCCG ACGACTACGA AGCCAGCGTG TTGCGTCCAT TTGTTGAAAG CATGGTACAA
GAAATCGGTC GTGCACTGCA ATTTTTCTTT ACCAGCACGC CGCACAACAA GGTTGATTAC
GTGATGCTGG CGGGCGGTTC GGCGGCGTTG CCGGGCTTGA CGGCGGCGGT CACGCAGCAC
ACCACATTCG CCTGCATGTT GGTCAATCCG TTTGACGGCA TGGAAATTGG TGAAGGGGTT
CGTTTGAAAA AAATGACGCG AGAAGCCCCG TCTTATCTCA CGTCATGCGG ACTGGCCCTG
CGGAGGTTCA TGCAGTGA
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| Protein sequence | MLGLDISSSS VKMVELGHDK AGNLVLERCA IVPLERGWIT DGNIEKFDEV ADAVRRLVKK
SGTKTKNVAM ALPPSAVITK KITLPGGMSD QELELQVETE ANQYIPFPLD EVSLDFCIVG
PSATSAGDVE VLIAASRREK VQDIQGLAEA AGLKPVIVDV ESYASRLATS RLIENLPHKG
VGSIVALFEV GAQTTSMQVI RDDEVLYDRD QAFGGAQLTQ LIVRQYGFSL EEAESKKRSG
ELPDDYEASV LRPFVESMVQ EIGRALQFFF TSTPHNKVDY VMLAGGSAAL PGLTAAVTQH
TTFACMLVNP FDGMEIGEGV RLKKMTREAP SYLTSCGLAL RRFMQ
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