Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2887 |
Symbol | |
ID | 3963101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3189636 |
End bp | 3191042 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637917706 |
Product | peptidase U62, modulator of DNA gyrase |
Protein accession | YP_524129 |
Protein GI | 89901658 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAC CCAACACCAC CAAGACAGCC ACCCCCGCTC AGCGCGACCC TGACAGGGGC TTCAGTTACA GCCGTTCTTT TTTTGAGGGC TTGGTCGACA GCGCCCTGGC GCACGCCAAA AAACTCGGCG CCAGCGACGC CGGGGCCGAA GCGTCCGAGG GCTGCGGGCT GAGCGTATCG GTGCGCAAGG GGGAGCTGGA AAATGTGGAA CGTAACCGCG ACAAGTCGCT CGTCGTCACG GTCTATTCGG GTCAGCGCCG GGGTAACGCC AGCACCTCTG ACTTTTCCCA CGTTGCGATC GAGCAGACCG TGCAGGCTGC GTATGACATT GCACGCTTCA CGGCCGAAGA CCCGTTTGCG GCCTTGCCCG ATGTGCAGGA CATTGCCCAG CCCTCAGAGC AGCGCACCGA CCTGGATTTG TTCTTCCCGT GGGTGATCAA CAGCGAGCAG GCGGCGGCAA TCGCCATGGC TTGTGAGGCG GCGGCGGTGC AAACCGACAA GCGCATCACC AACAGCGAGG GCGCGGCCGT GTCAGCGCAG CAATCGCATT TTTTCAGCGC GCACACACAT GGCTTTCGGG GTGGTTATGC CAGTTCGCGC CACTCCCTGT CGGTGTCGCC GATCGCGGGC AAGGGCAGCG GCATGCAGCG CGATGCCTGG TACAGCTCTC AGCGCAACGC CGATGAGCTG GCCTCGCCCG AAGCCGTGGG CCGCTACGCC GCCGCGCGCG CCTTGAGTCG TCTGAATTCG CGCAAGATTG CCACCACCGA GTGCCCGGTC TTGTTTGAGT CGCCGCTGGC CGCTGGCCTG CTGGGCAGCT TTGTACAAGC CATCAGTGGC GGCTCCCTGT ACCGCAAGAG CTCATTTCTG CTCGACTCGC TGGGCCAGCA GGTGCTGGCC AAACACATTG ATATTCTGGA AGACCCGTTT GTCAAACGCG GCAAAGGCAG CTCGCCGTTT GATGACGAGG GTGTCCGGGT CAAAGCGCGC CAGGTGGTGC AAGCCGGGCG GGTGCAGGGC TATTTTCTGG GCAGCTACTC GGCCCGCAAG CTTGGCATGA AGACCACCGG CAATGCCGGG GGTTCGCACA ACCTCATCTT GACGTCGCGC CTGACGCGCC CCGGTGATGA CCTGAACGCG ATGCTCGAAA AACTGGGCAC CGGCTTGTTC GTGACCGAGT TGATGGGCAG CGGTGTGAAC TACGTTACCG GCGACTACTC CCGCGGTGCC AGTGGCTTCT GGGTTGAGAA AGGCCGCATT GCCTATCCGG TACACGAGAT CACCATCGCG GGCAACATGA GAGACATGCT CAAGGGGATC ACTGCCGTGG GGGCCGACAC CTACAACTAC GGCGCCAAGA CCATCGGTTC GGTGCTGGTG GACCGGATGA AGGTGGCAGG GAGTTGA
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Protein sequence | MKKPNTTKTA TPAQRDPDRG FSYSRSFFEG LVDSALAHAK KLGASDAGAE ASEGCGLSVS VRKGELENVE RNRDKSLVVT VYSGQRRGNA STSDFSHVAI EQTVQAAYDI ARFTAEDPFA ALPDVQDIAQ PSEQRTDLDL FFPWVINSEQ AAAIAMACEA AAVQTDKRIT NSEGAAVSAQ QSHFFSAHTH GFRGGYASSR HSLSVSPIAG KGSGMQRDAW YSSQRNADEL ASPEAVGRYA AARALSRLNS RKIATTECPV LFESPLAAGL LGSFVQAISG GSLYRKSSFL LDSLGQQVLA KHIDILEDPF VKRGKGSSPF DDEGVRVKAR QVVQAGRVQG YFLGSYSARK LGMKTTGNAG GSHNLILTSR LTRPGDDLNA MLEKLGTGLF VTELMGSGVN YVTGDYSRGA SGFWVEKGRI AYPVHEITIA GNMRDMLKGI TAVGADTYNY GAKTIGSVLV DRMKVAGS
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