| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2856 |
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| Symbol | |
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| ID | 3962381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3155249 |
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| End bp | 3156391 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637917675 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_524098 |
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| Protein GI | 89901627 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCACT CATCACACCC TGCTGTCGCC AGCCCCCGCA CCACCAGCCC GGCCCTGCGC
CTGGCAGGCA TTGAGCAAGC CCGACGCACC GCGCTGCTGG AACACGCAAC GCTGCCCGCT
GGCTGGATTG CGCCCTGGAT TGAACGCTCC TGGCAACGCT GCATCGACCT CGGGCTGCAA
CACCACGAGG CCGCCACATT CAGCCAGGTG TCCACACCGC AGATGCGCCG GACGCTGGAG
GCCAGCCAGC AACTGGTGCA GACTGCCAAG CCGGTTTTGG AGCACCTCGC GCGTGCCATT
GTCAATACCC GCTACTTCGC CATTCTGACC AACGCTTGTG GCGTGGTGGT CGATGCAAGC
GGCGCTATTG ACCACTCGGA CCCACGTGCC CACCTGATCA CACGGGTGGG CACCGATCTG
TCCGAACGCA GCATTGGCAC CACCGCCATT GGCACCGCCC TGACTGAACT TCAACCGGTC
TGGCTGCACC GGGGTGAACA TTTCTTTGAG ACCACCTCGG TCTACAGTTG TGCCGGTGCG
CCACTTTTTG GACCGGACGG CGCATGCGTG GGCATGCTGG ATCTGACCGG CATTGACGCA
CAAGAGCGAC CCGAGCTCAA GCACCTGGTC GTGCAGTCAG CCAGCAAAAT TGAAAATGCA
TTGGTCACCG CGCAAGCCCA CGCCTTGCTG CTGCGACTGA ACTGGCCGGG CAACATCCTG
GGCACGGATG CCGATGGCAT CCTGTGCCTG GACGCAGACG GCTGGGTGAC TGGGGCCAAC
CCGGTGGCGC GTCAGATGGT GCCCGGTCTG GCGATAGCGG GGGTGGTTGC CGTGCATATC
AGCGAGATGT TTGGTATTCC CTATGAGCAA CTTTTCGGTG CTGCCAAACG CCCCGGCAGC
GCGCTTGAGC TGCCACTGTG GAGCGGACTG CGCCTGCAGG CGCAAGTCAT CGCACGGGCC
GACGAGACAC ACCCGCTGCA ATCGAGCCCC GCCAGCGCGC CACCCCTGGC GCTGCGCGAC
GTCGAGGCCG CCATGATTCG CCAGGCGGTT GTCGACGCAC GCGGCAGCGT CGGGCAAGCC
GCCCGCGCTT TGGGCATCAG CCGCGCCACG GTGTACCGCA AGCTGGGACA AAAATCCACC
TGA
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| Protein sequence | MSHSSHPAVA SPRTTSPALR LAGIEQARRT ALLEHATLPA GWIAPWIERS WQRCIDLGLQ
HHEAATFSQV STPQMRRTLE ASQQLVQTAK PVLEHLARAI VNTRYFAILT NACGVVVDAS
GAIDHSDPRA HLITRVGTDL SERSIGTTAI GTALTELQPV WLHRGEHFFE TTSVYSCAGA
PLFGPDGACV GMLDLTGIDA QERPELKHLV VQSASKIENA LVTAQAHALL LRLNWPGNIL
GTDADGILCL DADGWVTGAN PVARQMVPGL AIAGVVAVHI SEMFGIPYEQ LFGAAKRPGS
ALELPLWSGL RLQAQVIARA DETHPLQSSP ASAPPLALRD VEAAMIRQAV VDARGSVGQA
ARALGISRAT VYRKLGQKST
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