| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2854 |
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| Symbol | |
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| ID | 3964016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3151997 |
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| End bp | 3153370 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917673 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_524096 |
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| Protein GI | 89901625 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.938378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCTA AAATATTGGT CGTTGACGAC GACCGCTACA CCCGCACGCT GATTGAGCAA
CTGATGCGCA AGAGCGCTGA AGTGCATCTG GCCGAGAGCG GCGAGCTTGC GCGGGAATTA
TTTGCCGCGA TTGACTTCAA TCTGGTGCTG ATGGATCAGC GCCTGCCCCA AGTCAAAGGG
CTCGACCTGC TGCGCGAATT CCGCTTGCAA CGTCCCAAAC TGGTGGCCAT TCTGATCACG
GGCCATGCTG ACGTGCGCGA CGCGGTGGCC GCCGTGCGCG AAGGTTTGTT TGACTACCTG
ACCAAGCCGT TCGAGGATCT GGAGGCGCTG GAAGCGGTGA TCGGCAAGGC GCTTGAGCTC
GATCGCGCCT ACCGGGAAAT TGACAGCTTG CGCACCCGCC TGGCTGTTGA ATCGGGTGCG
CCCGACATCA TCGGCCAGTC GCCGCCCATG GAGCGGCTGC TGGGTCAGGT TCGTGAGGTT
GCCGCACTGG ACACCACCGT GCTGCTCGAA GGTGAAAGCG GCACCGGCAA GGACGTTATC
GCCAAACTGA TCCACGCCTG GAGTCTGCGT TCCTCCAAGC CCTATCTCGA AGTCAACTGC
GGCGGCCTGC CGGAGTCCTT GTTGGAAAGC CTGCTCTTTG GCTATGAAAA AGGCGCCTTT
ACCGGCGCGG CCCAGGCCAA TCCCGGTTAC TTCGAGAAAG CGCATGGTGG CAATCTGTTC
CTCGACGAGA TTGCTGACAT GAGCCCCAAA TTGCAGAGCA GCCTGTTGCG CGTGCTGCAG
GACCGCAGCT TCTGCCGCAT CGGCAGCACC AACCCGCGCA AGACGGATTT TCGCCTGATC
TGCGCCACCA ATCGTCCGCT CGCCGGCGAG GTCAAGGCAG GACGCTTCCG CGAGGATCTC
TACTACCGCA TCAACGTGGT CGCGCTCAAC CTGCCGCCGC TGCGTGAGCG TGGCGACGAC
ATCGTCCGCC TGGCGGTGCA CTTTCTGGAT CGCTACAACA CCAAGTTTGG CAAGGATTGC
GGCCCCTTCA CACCGGCAGC AGTCCGCGCT TTGGAGGCCT GCCGCTGGCC CGGCAACGTG
CGCGAATTGC AGCATTGCAT TGAACGTGTC GTTGCGCTTC AACCCGGCGG CGTCATTGAC
GCGAGTCACC TCAGTCCGAC CTGCGATTTC CTGCCCGAGC TTGACCCGCA GGACAAGACC
ACAGCCTTGC CAACACTCGC TTACCAGGAG GCACGGACCG AGTTTGAGCG CGACTATATG
CGGCGTCTGC TTGAAGCGGC CGGCGGCAAT ATGTCGGAGG CGGCCCGTTG CAGCGGCATT
CCGCGCCAGA ATCTTTATGT GCGGATGAAA CGCTGGGGTT TTGTCATTGA TTAG
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| Protein sequence | MLPKILVVDD DRYTRTLIEQ LMRKSAEVHL AESGELAREL FAAIDFNLVL MDQRLPQVKG
LDLLREFRLQ RPKLVAILIT GHADVRDAVA AVREGLFDYL TKPFEDLEAL EAVIGKALEL
DRAYREIDSL RTRLAVESGA PDIIGQSPPM ERLLGQVREV AALDTTVLLE GESGTGKDVI
AKLIHAWSLR SSKPYLEVNC GGLPESLLES LLFGYEKGAF TGAAQANPGY FEKAHGGNLF
LDEIADMSPK LQSSLLRVLQ DRSFCRIGST NPRKTDFRLI CATNRPLAGE VKAGRFREDL
YYRINVVALN LPPLRERGDD IVRLAVHFLD RYNTKFGKDC GPFTPAAVRA LEACRWPGNV
RELQHCIERV VALQPGGVID ASHLSPTCDF LPELDPQDKT TALPTLAYQE ARTEFERDYM
RRLLEAAGGN MSEAARCSGI PRQNLYVRMK RWGFVID
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