| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2773 |
|---|
| Symbol | |
|---|
| ID | 3961321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 3061472 |
|---|
| End bp | 3062701 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637917591 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_524016 |
|---|
| Protein GI | 89901545 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.804833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCGC TCGGGCGTCT GATGAGTACG CCGGGTGTCA ACAGGAGGAC ATTGATTTTG
AAAATGTTGC GACTGCCTCG CTCTAAAGTG CAGATCGGCA CACCCCTGCC CTGGAGTGTG
CGCGATGAGC AGGGCACATT GTTGCTCTCG AAGGGGCATC TGGTTGAGAG CGAGCATCTG
CTGGACCAAT TGCTCCTGCG CGGTGCCTAC GTGGATGCCG AAGAAGCCCG AGCAGTCGCG
CTGGCGGACG CCCCGCAGCG GCCCAAGACG CCTGTGCCGC CGCCCAATAT TTTTGGCTTA
TGGGACAAAA CCACGGATGA TTTAAAAAAA CTGCTGGTCA GCGTGACACA CCAGGACGAC
TTCCCTGGCC GCATCGAGCA GTTTGCGCGC CACCTGCTGG AACTGGTTGA CTGCAACGCG
GACATCGCCA TTTATCGATG CGTGCGCCAA GACAACGCCC AGCATTTCTA TTTTGGCTAT
ACCCATGCCG TTTATACCGC CATGCTGTGC ATTTTGATGG CCCGCCATTT GAAATGGTCC
GAGACCCGTT TGATGAGCCT GGTGAAGGCG GCGCTCACCA TGAACCAGCC CATTCTTGAT
TTACAGGGGC AAATGGCGGG ACAGGATGTC CCCATGAAAG ACAAACAACG GGCTGCCATT
CACACCCATC CGACCCAATG CGTTGAATGG CTTCAAAAAG CCGGGGTCAC AGATGCCGAC
TGGCTGACTG CCATTGCGCA ACATCATGAG CGAGCGGATG GAACCGGCTA CCCGCTGGGC
TCTACCGAGG TCTGCGAGAT GGCGGTCGCA CTGCGCGTGG CAGATACCTT CACATCAAGA
ATAAGTCCGC GTGTCATGCG TCCGGCGCTG TCGCCTCAGG AGGCAGTACG GCAACTGTAT
CAAGAGGACA AAGGTGGTCC TCTGTCAACG GCAGTCATCA AGGAGTTGGG CATTTATCCG
CCCGGTGATT TCGTGAAACT TGCCTCCGGG GAACTCGGCA TCGTGGTGCA ACGCACGGCC
AACGCGCGAG CGCCCATTGT GGCCTCCATC ACCGACACGG CCGGTCGCCC GGTACCGCAT
ACCGTGCGCC ATGACACGGC GCAACCTGAA TTCGCGATCA AAGCCACCGC GTCTGACAAA
GTCATGCTGA TGCGTTTGCC GCCCGAGCGG CTATTCGGGT TTTCATTGGC ACCGCAGGCG
CCGGTGGTGC GGCCCAAACC GGTGCATTAG
|
|---|
| Protein sequence | MISLGRLMST PGVNRRTLIL KMLRLPRSKV QIGTPLPWSV RDEQGTLLLS KGHLVESEHL
LDQLLLRGAY VDAEEARAVA LADAPQRPKT PVPPPNIFGL WDKTTDDLKK LLVSVTHQDD
FPGRIEQFAR HLLELVDCNA DIAIYRCVRQ DNAQHFYFGY THAVYTAMLC ILMARHLKWS
ETRLMSLVKA ALTMNQPILD LQGQMAGQDV PMKDKQRAAI HTHPTQCVEW LQKAGVTDAD
WLTAIAQHHE RADGTGYPLG STEVCEMAVA LRVADTFTSR ISPRVMRPAL SPQEAVRQLY
QEDKGGPLST AVIKELGIYP PGDFVKLASG ELGIVVQRTA NARAPIVASI TDTAGRPVPH
TVRHDTAQPE FAIKATASDK VMLMRLPPER LFGFSLAPQA PVVRPKPVH
|
|---|
| |