| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2699 |
|---|
| Symbol | |
|---|
| ID | 3964245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 2969596 |
|---|
| End bp | 2970495 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637917520 |
|---|
| Product | alpha/beta hydrolase |
|---|
| Protein accession | YP_523946 |
|---|
| Protein GI | 89901475 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCAAG TCAAAAGAAT TTCTCATAGC GAGTTTGTCC CGATCCGCAA TCTGCAATAC
CACGTACGGG TGTGGGGCGA GCCTGCCCCT GACAAGACAC CGCTGGTGAT CGTGCATGGC
TGGATGGATG TGGCCGCCAG CTACCAGTTT GTGGTGGATG CGCTCAGCCA CGACCATTAC
GTGATCGCAC CCGACTGGCG CGGTTATGGC CAGACGCCCT CCGGTGGCGT GGACAACTTC
TGGTTTCCCG ACTACCTGGC CGATCTGGAC TTTCTGCTCG ACCATTACGC GCCAAACAGC
CAGGTCAATC TGGTCGGTCA CAGCATGGGC GGCAATGTGG CCATGCTGTA CGCGGGGGTG
CGCCCGCAGC GCATCCGCCG CCTGGTCAAT CTGGAGGGTT TTGGCCTGCC CGCCACCACG
CCCGACGAGG CACCGGGCCG ATATGCCCAC TGGATGGATG ATTTGAAGAA GCTGCATCGC
GGCGAGCTGG CGCTCAAGGC TTACGACACC GTGGACGGCG TGGCGCGCCG CCTGATGAAG
ACCAACCCGC GTTTGGGCTT GGACAAGGCC AACTGGCTGG CGCAACACTG GGCGCAGCAA
GACGCGCAAG GCAAGTGGGC GATCCTGGGC GACCCGGCGC ACAAGGTGTC GCACGCCCAG
CTCTACCGGC TGGAAGAAGT GCAGGCCATT TATGCGCGCA TCAGCATGCC GGTGTTGATG
GTCGAGGCAT CAAGCGACAG CATGGGCCAG TGGTGGAAGG GTAAATTCAC GCTGGCCGAG
CACCATGAAC GGCTGCGGGT GGTGCCGCAA CTGGAAATCG TCCGCGTCGA GGACGCCGGC
CACATGCTGC ACCATGACCA GCCGAAGCAG CTGGCCGAAC TGATCGAGCG TTTTTTGTGA
|
|---|
| Protein sequence | MYQVKRISHS EFVPIRNLQY HVRVWGEPAP DKTPLVIVHG WMDVAASYQF VVDALSHDHY
VIAPDWRGYG QTPSGGVDNF WFPDYLADLD FLLDHYAPNS QVNLVGHSMG GNVAMLYAGV
RPQRIRRLVN LEGFGLPATT PDEAPGRYAH WMDDLKKLHR GELALKAYDT VDGVARRLMK
TNPRLGLDKA NWLAQHWAQQ DAQGKWAILG DPAHKVSHAQ LYRLEEVQAI YARISMPVLM
VEASSDSMGQ WWKGKFTLAE HHERLRVVPQ LEIVRVEDAG HMLHHDQPKQ LAELIERFL
|
|---|
| |