| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2644 |
|---|
| Symbol | |
|---|
| ID | 3960780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2909606 |
|---|
| End bp | 2910760 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637917462 |
|---|
| Product | cupin 4 |
|---|
| Protein accession | YP_523891 |
|---|
| Protein GI | 89901420 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2850] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCT CGAAGCCCTT GTCTTTGCTG GGTGGTTTAA GCCCGCAATT ATTCATGAAA
CGGCATTGGC AAAAAAAGCC CTTGCTGATC CGCCAGGCTA TTCCCGACTT CAAGCCCTTG
CTGGACCGGG CGGCGCTGTT TGATCTGGCC GGGCACGAGG ACTCTCAAGC CCGCCTGGTG
GTGCAGCAGC CCGGCCAGAC GCCCGGCTGG CAACTCAAGC TCGGGCCTTT TGCGCGCCGT
ACCTTGCCAG CTTTGAGCCG CCCGGGCTGG ACGGTGCTGG TGCAGGGGGT CGATTTGCAG
CATGACGCCG TGCATGCGCT GATGAACCAA TTTCGCTTTG TGCCGGACGC CCGGCTGGAT
GACTTGATGA TCAGCTACGC CACCGATGGC GGCGGCGTGG GACCACACTT CGACAGCTAC
GACGTGTTTC TGCTGCAGGC ACAGGGGCGC CGGCGCTGGC GCATCGGGCG CCAGCCCGAC
CGCACCCTGC AGCCGGACGT GCCCTTGAAA ATTCTGGCCC ACTTTGAGCC GGAAGAAGAG
TTTGTGCTGG AGCCCGGCGA CATGCTGTAC CTGCCGCTGT TGCATGCCCA TGACGGCATT
GCCATGGGCG AATGCATGAC GTATTCGATT GGTTTCAGGT CACCGAGCCG GGCTGAACTG
GCGCGCGAGC TGTTGCAGCG CCTGGCAGAA GATGCAGAAG ACGCGGTCGG TGTGTCGGTG
TACCGTGACC CCAAGCAAGC GGCGGTGACG CAACCGGGAG AAATCCCGGC GCAATTGGTC
GAATTTGCGC GTGACGCCTT GCAGGACGCA CTCAAAGACC CGGCCGCGTT GGGGCGCGCC
CTGGGGGAAT ATATGACCGA GCCCAAGGCC AATGTGTGGT TCGATGCCAC CGAGCCGGTC
ACGCATCCGG CGGATCAGGC GTTGGCCGGG CAGGGCGGGC AAATCCAGCT GGATCGGCGC
ACCAAGATGA TGTTTGATGC CAAACACATT TTCATCAATG GCGAGAGCTT TCGCTCCGGT
GGGCGCGATG CGACCCTGAT GCGGCGCTTG GCTGACCAGC GCTATCTCAG TGCGCAAGAC
CTGGGCCGTG TCAGTCTTGA GGCCCGGTGT TTGTTGCAGG ATTGGCGGGA AGCGGGGTGG
TTGCATGAAC GCTGA
|
|---|
| Protein sequence | MDISKPLSLL GGLSPQLFMK RHWQKKPLLI RQAIPDFKPL LDRAALFDLA GHEDSQARLV
VQQPGQTPGW QLKLGPFARR TLPALSRPGW TVLVQGVDLQ HDAVHALMNQ FRFVPDARLD
DLMISYATDG GGVGPHFDSY DVFLLQAQGR RRWRIGRQPD RTLQPDVPLK ILAHFEPEEE
FVLEPGDMLY LPLLHAHDGI AMGECMTYSI GFRSPSRAEL ARELLQRLAE DAEDAVGVSV
YRDPKQAAVT QPGEIPAQLV EFARDALQDA LKDPAALGRA LGEYMTEPKA NVWFDATEPV
THPADQALAG QGGQIQLDRR TKMMFDAKHI FINGESFRSG GRDATLMRRL ADQRYLSAQD
LGRVSLEARC LLQDWREAGW LHER
|
|---|
| |