| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2625 |
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| Symbol | |
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| ID | 3963403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2887993 |
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| End bp | 2889966 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637917443 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_523872 |
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| Protein GI | 89901401 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.980205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACTT CTGTATTTTC CAAACGCGGT CGCGCACCCG TGCGCCTGGG CGTGTCTGTT
TTGGCTGTTT TTGCGGCTTT TCCTGCTTCT TCGGTGCTGG CGCAGGGCCA GTCCGAGGTG
GTGCTTAAAG AGGTGGTGGT GACTGCCACG CGGTTCGATG CTGAGGCTTT CACCTTACCG
TTTGGTGTCA GTGTGATTAC CAAGGACGAT ATTGCACGCG CTGGTGTGTC AACTGTGAAT
GAGGCAGTGA TCAAGCTGCT GGGTGTGCCT GGCCGCGTTG ATTACTACGG TGGTGGTGAT
TACGGCCTGG ATCTGCGAGG CTTTGGTTCC ACAGCAGGCA GTAATCAGGT GGTGATTGTG
GATGGGGTCA AGGTCAATGA GGCTGACTTG GGTGGAACCC GGTTGGCGGG CATTGCGATC
AACTCGGTTG AGCGCATTGA AGTGTTGCGC GGCAGCGGTT CGGTGTTGTA CGGCGAGGGC
GCCACTGGCG GCGTGATTGT GATCACGACC AAGGCGGGTC GTGGGTCCGC GCGAAAAAAT
TCAGCCGATC TCTATGCAGC GACTGGCAGC TACGGGCTCA ATGAGGTGCG TGCGAACGGC
ACCTTGGTGG CCGGTGGTTT CTCGCTGGAT GTGGCGGGTA ACAAGCGCCA GGCGGATAAC
CATCGCGACA ATTTCAAATC CAACGTGGAA GGTTCTTCAG CCCAGGCGCA ATGGAGCAAT
GATTGGCTGC GCGTGGGCGC CAGCTATGCC AATGACTCGT TGGACAGCGG TTTGCCGGGG
TCGTTGACTG CGGCCCAGTA CCAAGCGAAC CCGAGCCAGA CCACCAGTCC CAACACAACA
GGCAGCATCA AGAATACGCG CCAAACTTTG TTTGCCAGCG CTGAATTAGG TGCTTGGCAA
GTGGGTGTAG ACGTGGGTCA ACGAACCAAG AATCTTGATA GTCTGAGCAG TGGTGTGTCT
ACCTACCGGT CCGACGTGGA TGCCAGCACG CTGGCGTTGC GTGCCAGAAA CGAGGCAAAG
CTTGGAAATC TTCGCAATGC GCTGACGCTG GGACATGACC AGTCTGACTG GAAACGCATC
GTGCCGGGAG CTTTTGGATC GGTCTCGCAG CAAAAAACAA GTGCTTTTTA TGCGCAGGAC
GAAGTCACCT TGAGCGGCGG CACGCGTGTG ACTGCCGGCT ATCGGTCGGA GAACATCAAA
CAAAGCGACA CCTTCACTGC AAGCACCAAT AACGATCAGA CGGCCTGGGA GTTGGGGATC
ATCCAGCCAA TGTCTGATGC CTTGTCGATT TTTGGGCGTG TGGGGAACAG CTTTCGACTG
GCCAATATTG ACGAACTGGG CTTCACCACA CCCGGTGCCG TTTTGCAACC CCAGACTTCT
CGTGACCTGG AGCTGGGCAG CCGCTGGAAA TATGCTGGAG GCCGGGTTGA ACTACGTTTC
TACCGGAACA ACTTGACCAA CGAACTGGGC TATGACCCAA CGGTGGCCAA CGCCAATTCC
TGGAGTGGGC TGGGTGCCAA TGTGAACTTT GACCCCACGC GGCGCCAGGG ACTAGAGCTT
GAAACCCAGC ACGACTTAAG CAAAACTCTG GGCGTTCGGG TCAATGTTGG CGTTCGTGAA
GCCAAATTTA CCGAAGGCGC ACACAACGGC AAAAATGTAC CGCTGGTGGC AGGCACCACT
GTGGCGTTAC GCGCCGATTG GCGGCCGGCA CCTGCGCATT CCGTGAATGC CGGGGTGGTG
TGGGTGGCGT CACAGCATGT GGACTTCAAC AACACTTGCA CGGTGCCGAG CTACGCCACG
GTCGATGCGC GCTATGCCTA CCAGTGGCGC AGTGTGGAGC TGTCGCTGGG TTTGACCAAT
CTGCTCGATG CCAAGTACTA CACCCAAGCC TTTAAATGCA CAGCGGGGGT CACCAATGGG
ATTTACCCGG AAGCTGGACG TGCTGTCACT GCGGCTATGC GGGTGGCTTT TTAA
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| Protein sequence | MKTSVFSKRG RAPVRLGVSV LAVFAAFPAS SVLAQGQSEV VLKEVVVTAT RFDAEAFTLP
FGVSVITKDD IARAGVSTVN EAVIKLLGVP GRVDYYGGGD YGLDLRGFGS TAGSNQVVIV
DGVKVNEADL GGTRLAGIAI NSVERIEVLR GSGSVLYGEG ATGGVIVITT KAGRGSARKN
SADLYAATGS YGLNEVRANG TLVAGGFSLD VAGNKRQADN HRDNFKSNVE GSSAQAQWSN
DWLRVGASYA NDSLDSGLPG SLTAAQYQAN PSQTTSPNTT GSIKNTRQTL FASAELGAWQ
VGVDVGQRTK NLDSLSSGVS TYRSDVDAST LALRARNEAK LGNLRNALTL GHDQSDWKRI
VPGAFGSVSQ QKTSAFYAQD EVTLSGGTRV TAGYRSENIK QSDTFTASTN NDQTAWELGI
IQPMSDALSI FGRVGNSFRL ANIDELGFTT PGAVLQPQTS RDLELGSRWK YAGGRVELRF
YRNNLTNELG YDPTVANANS WSGLGANVNF DPTRRQGLEL ETQHDLSKTL GVRVNVGVRE
AKFTEGAHNG KNVPLVAGTT VALRADWRPA PAHSVNAGVV WVASQHVDFN NTCTVPSYAT
VDARYAYQWR SVELSLGLTN LLDAKYYTQA FKCTAGVTNG IYPEAGRAVT AAMRVAF
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