| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2595 |
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| Symbol | |
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| ID | 3962003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2857307 |
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| End bp | 2859427 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637917413 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_523842 |
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| Protein GI | 89901371 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.156058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGG ACCCGTCCAC CGAAGTCGTC GCCCGCGAAC TGCGCGGCAA CATTCTTCTC
GTCATGATCA ATAACCCGCC GGTCAACGCG CTGGGTGTGG CCGTACGGTG CGGCATCGTG
GCGGCGATCG ACGCAGCCGA TGCAGACCCA GCCGTCCAAG CGGTGCTCAT CATCGGGACA
GGACGCAACT TCATCGCAGG CGCAGATATC CGTGAGTTCG GCAAGCCGCC ACTGCCGCCG
TCATTGCCCG ATGTCTGCAA CCGGATTGAA GCCTGCAGCA AGCCCGTGGT TGCAGCGATC
CATGGCGCTG CTTTGGGTGG TGGACTGGAG ATCGCGCTCG CGGCCCACTA CCGGTTGGCG
GCGACTGATG TCAAGCTCGG ACTACCCGAG GTTCAGCTCG GCCTGATGCC GGGTGCGGGC
GGCACGCAAC GCACACCACG TTTGATCGGT GCAAAAGCCG CCCTGGACCT GATGCTCAGC
GGCCGCCACA TGGGTGCCGA AGAAGCGCAC GCGCTCGGTT TGGTTGACCG GCTGGGACAC
AGCAATGACA TCCTCGCCGA TGGACTGGCG TACACGCAGG AATTGCTGGC CACGCACGCC
CCGGTGCGCC GCACGCGCGA TGCCCAGGCG CTTTCCGACC GGCAGGCGAA CCGTGCCAGC
ATCGAGGCCG TGCGCGCTGA AACAGGCAAG AAGTCACGCG GCCTGTTCTC ACCGCTGAAA
ATTGTCGAGG CGGTTGAGGC GGCGCTCGAC AAGTCTTTCG ACGAAGGCCT GCGCATTGAG
CGCGAGCTGT TCCTGCAATG CCTGGACAGT GCGCAGCGCG CCGGACTGAT CCACGCCTTC
TTTGCCGAGC GTGAAGTGCT CAAAGCGCCC GAGACTCGCA ACACGAAGCC ACGCGCCATC
GCGCATGTCG GCGTGGTCGG CGGTGGCACG ATGGGCGCCG GCATCGCGGT GGCGGTACTC
GATGCGGGCC TGTCTGTCAC GATGATCGAG CGTGACGAAG CGGCGCTGGC ACGCGGGCAT
GCCCATATTG AAAAGGTCTA CAACGGTCTG ATCGCCAAGG GGCGCATGAC CACTGATGCC
AAGGCCGCCA ACCTGGCGCG CTTCGTCGGC AGCACCTCGT ACGACGCACT CGCGCCAGCC
GATATCGTGA TCGAGGCAGT GTTCGAGGAC ATGGCGGTCA AGCAGGCTGT TTTCGCCGAA
CTCGATCGCG TGTGTAAACC TGGTGCGGTG CTGGCCACCA ACACGTCCTA TCTCGACATC
GACGTCATCG CCGCCAGCAT TTCACGTCCA GCGGACGTCG TGGGTCTGCA TTTTTTCTCG
CCCGCCAACA TCATGAAGTT GCTCGAAATC GTGGTCCCGG CCAAGGTCTC GGCGGACGTC
GTGGCCACCG CATTTGAACT CGCGAAAAAG CTGCACAAGG TGCCGGTGCG GGCCGGCGTG
TGCGACGGCT TCATCGGCAA CCGGATCCTC GCGGCTTATC GCATGGCGGC CGACTACATG
ATGGAAGACG GCGCCTCGCC CTACCAGATC GACCAGGCCG TGCGAGACTT CGGTTACCCG
ATGGGGCCGT TCCAGGTGTC TGACCTGGCC GGCGGTGACA TCGGCTGGGC CACCCGAAAA
CGCAAGGCGG CCACACGCGA TCCGCGGGCA CGTTACGTGC AGATTGCCGA CCGCATCTGC
GAGCGTGGCT GGTTCGGCCA GAAGACTGGC CGCGGCTACT ACCTGTACCC CGAAGGCGCG
CGCACCGGAA CGCCCGACCC CGAGATTGAG GCCATCATCG ATGCCGAGCG CGCGCGGGCC
GGCATCACGC CGCGCAGCTT CACCAACGAA GAGATCATGC GCCGCTACAT GGCCGCGATG
ATCAACGAAG GCGCCAACGT CGTGCATCAG CGCATCGCGC TGCGCCCGCT CGACGTGGAC
GTGACCTTCC TGTACGGCTA CGGTTTTCCG CGCCATCGCG GCGGCCCGAT GAAATACGCC
GACACGCTGG GCCTGCCCAA GGTGCTGGCC GACATCCGCG AGTTCGCCAA AGAAGACCCG
TTGTTCTGGC AGCCCTCGCC GTTGCTGGTC GAGCTGGTCG AACGCGGCGC CAATTTCGAC
AGTCTCAATA AATCCGAATA A
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| Protein sequence | MSQDPSTEVV ARELRGNILL VMINNPPVNA LGVAVRCGIV AAIDAADADP AVQAVLIIGT
GRNFIAGADI REFGKPPLPP SLPDVCNRIE ACSKPVVAAI HGAALGGGLE IALAAHYRLA
ATDVKLGLPE VQLGLMPGAG GTQRTPRLIG AKAALDLMLS GRHMGAEEAH ALGLVDRLGH
SNDILADGLA YTQELLATHA PVRRTRDAQA LSDRQANRAS IEAVRAETGK KSRGLFSPLK
IVEAVEAALD KSFDEGLRIE RELFLQCLDS AQRAGLIHAF FAEREVLKAP ETRNTKPRAI
AHVGVVGGGT MGAGIAVAVL DAGLSVTMIE RDEAALARGH AHIEKVYNGL IAKGRMTTDA
KAANLARFVG STSYDALAPA DIVIEAVFED MAVKQAVFAE LDRVCKPGAV LATNTSYLDI
DVIAASISRP ADVVGLHFFS PANIMKLLEI VVPAKVSADV VATAFELAKK LHKVPVRAGV
CDGFIGNRIL AAYRMAADYM MEDGASPYQI DQAVRDFGYP MGPFQVSDLA GGDIGWATRK
RKAATRDPRA RYVQIADRIC ERGWFGQKTG RGYYLYPEGA RTGTPDPEIE AIIDAERARA
GITPRSFTNE EIMRRYMAAM INEGANVVHQ RIALRPLDVD VTFLYGYGFP RHRGGPMKYA
DTLGLPKVLA DIREFAKEDP LFWQPSPLLV ELVERGANFD SLNKSE
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