| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2572 |
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| Symbol | |
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| ID | 3960902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2832943 |
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| End bp | 2834373 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637917391 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_523820 |
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| Protein GI | 89901349 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex
[COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.378709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCCT GCTACGTTTT ACTTGACCTG GAGACCACCG GTGGCAATCC GGTGCACGAC
CGCATCACCG AGATTGCCGC CGTGCGCATT GAAAACGGGC AAGAGGTGGC GCGCTGGAGC
ACGCTGGTCA ATCCGGGCTG CTCGATCTCC CCGTTCATCC AGCACCTGAC CGGCATCAGC
AACGCCATGG TGCGCGGCGC CCCCGGCTTT GAGACGGTGG CGCAGCACTT GCTGGCGCTG
CTCGACGGCG CCGTGCTGGT GGCCCACAAC GTGCGCTTTG ACCACGGTTT TTTGCTGAAC
GAACTGGCCC GCCTGGACGT GGCGCTGCGG GTCAAGACCC TGTGCACGGT GCGCCTGTCG
CGCCTGCTGT ACCCGCAACA CAAGGGCCAC GGCCTGGACG CCATCATGCA ACGCCACGGC
ATCCGCACGC TGGAGCGCCA TCGCGCCATG GGCGATGTGG AGGTGATGCA AGCCTGGCTC
CAGATTGCCC GGCAGGAGCA CGGCGCAGAG CTGCTCGGGC AACAGGCACT GGCGCTGTTG
CAAAGCAGCG CCACGCTGCC ACCGCAGTTG GAAACCCGGG TGGCTGACAT CCCCGAATCG
GTTGGGGTTT ACATTTTTTA TGGTGAAGGG CCGCTGCCCC TGTACATCGG CAAGAGCATC
AAGCTGCGCA GCCGGGTGCT GGCGCATTTT CAGGCTGCCA GCCGGGCGCC GCGTGAGATG
CGCATGGCCC AGGAGATCCG GCGCATCGAG TGGCTGGAGA CTGCCGGTGA AATCGGCGCC
CTGCTGCTCG AAGCCCGGCT GGTGAAAGAA AGGCAGCCAG CCTACAACCG CCGGCTGCGC
CGCGAAAGCA CGCTATGCGC CTGGCGGCTG GCGGACGACC CCTTGGCCCG GCCGCTGCTG
AGCCTGGTAC GCGGTGAGGC CTTGCAGCCG CAGGAGTTTG GGCAGATGTA CGGCGTCTAC
CGCTCCAAGA ATCAGGCCCT GAGCAGTTTG CGCGAACTCG CCGACAGCCA GGGTCTGTGC
CTGCAGGCGC TCGGCCTGGA GTCCGGCAAG GGCCGCTGTT TTGCACACCA GATTGGGCGC
TGCCAGGGCG TCTGTTGTGG CGAAGAAAGT CCCGAACGGC ATCACCTGCG CCTGCAACTG
GCGCTGGCGC AGCAAAAGTT GCTGGTCTGG CCCTATCCCG GCAAGGTGGG CCTGCGCGAG
TACAACGCCC GCAGCGAGCG CACGGACATC CATATCTTTG ATCAGTGGTG CCACCTGGCC
ACGGTGCATG ATGAAACCGA ACTGACGGAC GCCCTGGGCA GCCGCAGCAC GCTGGCGTTT
GACCTCGATA CCTACCGGCT CCTGCTGAAA CACATCGCAG CACCGGGCAA GGGCAAATTC
GAGTTGATCG ACTGGACCGA GAAACAGCAG CAGACGCTCA ACTCGCTATA G
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| Protein sequence | MLPCYVLLDL ETTGGNPVHD RITEIAAVRI ENGQEVARWS TLVNPGCSIS PFIQHLTGIS
NAMVRGAPGF ETVAQHLLAL LDGAVLVAHN VRFDHGFLLN ELARLDVALR VKTLCTVRLS
RLLYPQHKGH GLDAIMQRHG IRTLERHRAM GDVEVMQAWL QIARQEHGAE LLGQQALALL
QSSATLPPQL ETRVADIPES VGVYIFYGEG PLPLYIGKSI KLRSRVLAHF QAASRAPREM
RMAQEIRRIE WLETAGEIGA LLLEARLVKE RQPAYNRRLR RESTLCAWRL ADDPLARPLL
SLVRGEALQP QEFGQMYGVY RSKNQALSSL RELADSQGLC LQALGLESGK GRCFAHQIGR
CQGVCCGEES PERHHLRLQL ALAQQKLLVW PYPGKVGLRE YNARSERTDI HIFDQWCHLA
TVHDETELTD ALGSRSTLAF DLDTYRLLLK HIAAPGKGKF ELIDWTEKQQ QTLNSL
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