| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2340 |
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| Symbol | |
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| ID | 3962673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2572796 |
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| End bp | 2574193 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637917156 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_523588 |
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| Protein GI | 89901117 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.110215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGTACA AAATCTACGA AACTCAACGC TCTTTGATGG AGCCTTTCTC CGACTTGGCG
CACTCTGCTT CCAAGGTCTA CGGTAATCCG CTGTCCATGT TCGGGCAAAA CCCGTTTGCC
CAGCGTATTT CTGCTGGCTA CGATTTGATG CATCGTTTGG GCAAAGATTA CGAAAAACCG
GAATTTGGCC TGCGCACGGT CGATGTCGAC GGGGTCGAGG TCGCCATTCA CGAGCGCGTA
GAGATTGACA AGCCCTTTTG CGAATTGCGC CGCTTCAAAC GGTTCACCGA TGACCAGACC
ACACTCGGAA AGCTCAAAGG GCAGCCCGCT GTGCTGATCG TGGCGCCCCT GTCCGGTCAC
TACGCGACGC TGCTGCGCGA TACCGTCAAG ACCATGCTCA AAGATCACAA GGTCTACATC
ACGGACTGGA AGAATGCGCG CCTGGTTCCC CTGTCAGAAG GTGAATTTCA TCTGGACGAC
TATGTGAACT ATGTACAGGA GTTCATCCGG CATTTGCAGG GCATTTACGG TAATTGCCAT
GTGGTGAGCG TGTGCCAGCC CACGGTGCCG GTGTTGGCCG CGGTTTCCCT GATGGCCAGT
CGTGGTGAGT TGACACCCTT GAGCATGACC ATGATGGGCG GGCCCATTGA TGCCCGCAAA
TCGCCCACGG CCGTGAACAA CCTGGCGATG AACAAGAGTT TTGAGTGGTT TGAGAACAAC
GTGATTTACC GCGTTCCCAC CAACTTTGCC GGTGCTGGTC GGCGGGTCTA CCCCGGTTTC
CTGCAGCATT CGGGCTTTGT GGCCATGAAT CCGAGCAACC ATGCCAAGAG CCATTACGAC
TACTTCAAGG ACCTGATCAA GGGCGACGAC GCGAGCACCG AAGCGCACCG CAAGTTCTAT
GACGAGTACA ACGCCGTGCT GGACATGGAC GCCAACTACT ACCTGGAAAC CATCCGGGTC
GTTTTTCAGG AGTTCTGCCT GCTCAACGGC ACCTGGAATA TCAAGGGCGT GGACGGAAAA
ATTGAACCGG TCCGCCCGCA AGACATTACC ACCACCGCCT TGTTCTCGGT TGAAGGTGAG
CTTGACGACA TCTCCGGCTC AGGCCAGACC GAGGCCGTGC ACAGTATCTG CAGTGGTGTT
CCCAAGTCGG AGCAAAAACA CCTGGAGGTC AAGGGCGCCG GACACTTTGG CATCTTCAGC
GGCCGACGCT GGCGCGAGAT GGTGTACCCA GCGGTCAAAT CGTTCATCCT CAGTCACCAA
CCGGTAGCCG CAAAACCGGC ACCGGTTGTC GATCCGGTTA CCCCTGTGAA AATTGAGAAA
AAACCATCGG CAGCCCCCGT CAAACGGGAA GAAGTAGCTA CTAAAAATGT AGCAAGCAAG
TCTCTGCGCA AAAAGTAA
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| Protein sequence | MLYKIYETQR SLMEPFSDLA HSASKVYGNP LSMFGQNPFA QRISAGYDLM HRLGKDYEKP
EFGLRTVDVD GVEVAIHERV EIDKPFCELR RFKRFTDDQT TLGKLKGQPA VLIVAPLSGH
YATLLRDTVK TMLKDHKVYI TDWKNARLVP LSEGEFHLDD YVNYVQEFIR HLQGIYGNCH
VVSVCQPTVP VLAAVSLMAS RGELTPLSMT MMGGPIDARK SPTAVNNLAM NKSFEWFENN
VIYRVPTNFA GAGRRVYPGF LQHSGFVAMN PSNHAKSHYD YFKDLIKGDD ASTEAHRKFY
DEYNAVLDMD ANYYLETIRV VFQEFCLLNG TWNIKGVDGK IEPVRPQDIT TTALFSVEGE
LDDISGSGQT EAVHSICSGV PKSEQKHLEV KGAGHFGIFS GRRWREMVYP AVKSFILSHQ
PVAAKPAPVV DPVTPVKIEK KPSAAPVKRE EVATKNVASK SLRKK
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