| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2258 |
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| Symbol | |
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| ID | 3960813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2471048 |
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| End bp | 2471842 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637917079 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_523511 |
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| Protein GI | 89901040 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTACCG ATTCCCACTG CCATCTCAAT TTTCCTGAAC TCCTCTCCCA ACTGCCGGCC
ATCCGGCAAG CCATGAGCGA GGCCCGGGTG GATCGCGCTT TGTGCATCAG CACCACGCTG
GAGGAGTTTG GCACTGTGCA TGCGCTGGCC ACCCAATATG ACAATTTTTG GGCCACGGTT
GGTGTCCATC CCGACAGTGA AGACGTCCAG GAACCCAGCC TGCAGGATCT GCTCAGCCGC
GGCCAGTTGC CGCGCGTGGT CGGGGTCGGT GAAACCGGGC TTGACTATTA CCGTCTGGGC
GGGCGCAGCG TGGCCGACAT GGCGTGGCAA CGCGAGCGCT TTCGCACCCA CATCCACGCC
GCCCGGCAGT TGGCCAAACC ACTGGTGATT CATACCCGAA GCGCATCCGA CGACACCCTG
GGCATACTTC GAGAAGAAGG TGAAAACGGC ACTTTGGGCA GCGCCGGGGG TGTCTTTCAT
TGTTTTACCG AAACGCTTGA CGTGGCGCGG GCGGCGCTGG ACTTGGGTTT CTACATTTCT
TTTTCCGGCA TCCTGACTTT CAAAAACGCC CAGGACCTGC GCGATGTCGC CGCCTTTGTG
CCGTCGGACC GTCTGCTGAT CGAAACCGAC AGTCCCTATC TGGCGCCAGT GCCTTACCGT
GGCAAAACCA ACAATCCGTC GCTGGTGCCG TTTGTGGCGG CGCAGTTGGC TGAGACCCGA
CACCGCCCGG TGGAACACAT CGCGGAGATC ACCAGTCGCA ATTTCGAGAC GCTGTTCAAA
GGGGTTTTGT TGTGA
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| Protein sequence | MFTDSHCHLN FPELLSQLPA IRQAMSEARV DRALCISTTL EEFGTVHALA TQYDNFWATV
GVHPDSEDVQ EPSLQDLLSR GQLPRVVGVG ETGLDYYRLG GRSVADMAWQ RERFRTHIHA
ARQLAKPLVI HTRSASDDTL GILREEGENG TLGSAGGVFH CFTETLDVAR AALDLGFYIS
FSGILTFKNA QDLRDVAAFV PSDRLLIETD SPYLAPVPYR GKTNNPSLVP FVAAQLAETR
HRPVEHIAEI TSRNFETLFK GVLL
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