Gene Rfer_2255 details

Gene Information

• Locus tag: Rfer_2255
• Symbol: tmk
• ID: 3960810
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 2468932
• End bp: 2469579
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637917076
• Product: thymidylate kinase
• Protein accession: YP_523508
• Protein GI: 89901037
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACAG AGGGAATTTT CATCAGTTTC GAAGGCATTG ATGGCGCGGG CAAGTCCACG 
CACATTGACG CCCTGGCGCA GGCGTTCCGG GCCCAGGGCC GGGCGGTGAC GCTGACACGT 
GAGCCCGGCG GCACGCCCTT GGCCGAAAAG CTCCGTGTGC TGGTGTTGAA CGACGCCATG 
GATGCCATGA CCGAGGCCCT GCTGGTGTTT GCCGCCCGGC GCGATCATCT GCAACAACTG 
ATTGAGCCGG CGCTGGCCCG CGGTGATGTC GTGTTATGCG ACCGCTTTAC CGATGCGACC 
TTTGCTTACC AAGGTGCCGG GCGCGGTTTT GATTTAAAAA TACTCTCATT TTTAGAGCGC 
ACTGTGCAGT CAATACAAGG GCTAGAGCCT GATTTCATCA GAAACCCGGA TTTGACGGTG 
TGGTTTGATT TGGCCGCTGC CATTGCGGCG CAGCGTTTGG CAGGTGCACG CAGCCCGGAC 
AAATTTGAGG CCCAACCGGT CGAATTTTTC CGGCGTGTGT CTGATGGCTA CCTGAATCGC 
ATGACGGCTT GCCCCAGCCG CTTTGCCCGC ATTGAGGCCA ACCAGACGCG CGAGGCGGTC 
TGGCAAGACG TGTTGCACGC GGTTCAAGCC AGAGGCTGGC TGACATGA 

 

Protein sequence

MTTEGIFISF EGIDGAGKST HIDALAQAFR AQGRAVTLTR EPGGTPLAEK LRVLVLNDAM 
DAMTEALLVF AARRDHLQQL IEPALARGDV VLCDRFTDAT FAYQGAGRGF DLKILSFLER 
TVQSIQGLEP DFIRNPDLTV WFDLAAAIAA QRLAGARSPD KFEAQPVEFF RRVSDGYLNR 
MTACPSRFAR IEANQTREAV WQDVLHAVQA RGWLT