| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2073 |
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| Symbol | upp |
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| ID | 3961024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2248555 |
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| End bp | 2249202 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916893 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_523329 |
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| Protein GI | 89900858 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAGCC CCAACAACGA CCCTCAAGTT CACGTCATCA ACCACCCGCT GGTGCAGCAC
AAACTGACGC TGATGCGCAA AAAAGAAGCG AGCACCAACA GTTTTCGCAC CCTGCTCAAC
GAGATCAGCA TGCTGATGGC TTATGAAGTG ACGCGCGATA TGCCGATGCA AGAAGTCGAA
ATCGAGACGC CGCTGGAAAC CATGAGCGCC AAAGTGATTG ACGGCAAAAA ACTGGTGCTG
GTGTCGATCC TGCGCGCGGG CACCGGCATT CTGGACGGCA TGCTCAGTGT CGTGCCGGGC
GCCCGGGTCG GGCACATTGG CCTGTACCGC GACCCCAAGA CGCTGCAGGC GGTGGAGTAC
TACTTCAAGA TGCCCAAGGA CATGCAGGAA CGCGACGTGG TGGTGGTCGA CCCGATGCTC
GCCACCGGCA ACTCCGCCGT GGCGGCGATT GAACGCGTCA AGGCGACCCA CCCCAAGTCG
ATCAAGTTCG TCTGCCTGCT GACCTGCCCC GAAGGCGTCG CCACACTGCG CAAAGCGCAC
CCGGATGTGC CGATCTACAC CGCAGCCATC GACCGCCAGC TCAACAGCCA CGGCTACATC
CTGCCGGGCC TGGGTGACGC CGGTGACCGG ATCTTTGGCA CGCAGTGA
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| Protein sequence | MNSPNNDPQV HVINHPLVQH KLTLMRKKEA STNSFRTLLN EISMLMAYEV TRDMPMQEVE
IETPLETMSA KVIDGKKLVL VSILRAGTGI LDGMLSVVPG ARVGHIGLYR DPKTLQAVEY
YFKMPKDMQE RDVVVVDPML ATGNSAVAAI ERVKATHPKS IKFVCLLTCP EGVATLRKAH
PDVPIYTAAI DRQLNSHGYI LPGLGDAGDR IFGTQ
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