Gene Rfer_2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2057 
Symbol 
ID3962104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp2227348 
End bp2228004 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID637916877 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_523313 
Protein GI89900842 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.34805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCTC TCTCTCACGC CCTGGCCCAG ACCCCTGCTT TCAACGCGGG TTTGCTGCTC 
AGCCTCTCGC TCATCATGGC CTTGGGACCC CAGAACGCGC ATGTGCTGCG CATGGGTTTA 
CGGGGCCAGC ACCTGTGGCT GACGATTGGC CTTTGCATTC TGTCGGACGT GCTGTTCATT 
GGCATGAGCA TTTTTGGCCT GGGTCAGTTG GGCGGCCTGT CTGACACGAT CAAGAACGCC 
CTGGTGGGCG GTGGCATCCT GTTCCTGCTG GTTTATGGCG CCCAGGCGTT TGCGCGCTTT 
CGCAGCGGCG CGGCCGCTGC CATGTCGCAG GCCAACGCCA GTGATGAGGT CGTCATGACA 
CGCCGCCAGG CCATCCTGGC CGCGCTGGCT TTTTCATGGC TCAACCCGCA TGTCTGGCTC 
GACACGGCCG TCTTGCTCGG CACCGCCTCA CTGGCCTGGG GCCAGCCGGG CAACGCGGTG 
TTTGGCGCGG GCGCGGCCAC CGGCTCGGTG ATCTGGTTTA CAGGCTTGGG CGTGTGCCTG 
TTGTGCCTGG GCCCGCGCCT GCGTCAACCC GGCGTGTGGC GGGCGCTGGA CGCACTGGTG 
GCTTTGCTGA TGTGGGGCAC CGCCCTGGTG CTGGGGCTGG GTTTGCTGGG GCTTTAA
 
Protein sequence
MLPLSHALAQ TPAFNAGLLL SLSLIMALGP QNAHVLRMGL RGQHLWLTIG LCILSDVLFI 
GMSIFGLGQL GGLSDTIKNA LVGGGILFLL VYGAQAFARF RSGAAAAMSQ ANASDEVVMT 
RRQAILAALA FSWLNPHVWL DTAVLLGTAS LAWGQPGNAV FGAGAATGSV IWFTGLGVCL 
LCLGPRLRQP GVWRALDALV ALLMWGTALV LGLGLLGL