| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2001 |
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| Symbol | lpxB |
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| ID | 3962225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2156944 |
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| End bp | 2158113 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916821 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_523257 |
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| Protein GI | 89900786 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAATC AAATTAGCCA ACATCTCCAG GTGGCGCTGG TGGCCGGCGA AACCTCGGGT
GATCTGCTTG CGGGTTTGCT GCTGGATGGT CTGCGGGAGC AATGGCCACT TATGACCGCA
GTCGGCATCG GCGGCCCTCA GATGGCGCGC CGTGGCCTGG TGGCCTGGTG GGGGCATGAC
AAACTCTCGG TGCATGGCTT TGGTTGGGAG GTGCTGCGCC GCTACCGCGA GATTGTAGGT
ATTCGCCGCC AACTCAAAAC CCGGCTGCTG CGGCAGCAGC CCGATGTCTT CATTGGTGTG
GATGCGCCCG ACTTCAACCT GGATCTGGAG CAAGACCTGA AAGCCCAGGG CATCAAGACC
GTGCATTTTG TGTCACCGTC CATCTGGGCC TGGCGCCCTG AGCGGGTAGA GAAGATTCGC
CGCAGTGTCG ACCATGTGTT GTGTATTTTC CCGTTCGAGC CCGCTCTGCT GGCCCGGCAC
GGCATCGCCG CGACCTACGT TGGGCACCCA TTGGCCAACG TGATTCCGAT GGAGCCCGAT
CGATCGGCTG CGCGTGCCGC CTTGGGACTG GCCGATGGGG ACCAAGTTGT CGCGATCTTG
CCCGGCAGTC GTCAATCTGA AATCAATCAT CTGGCTTTAA GGTTCTTTCA GGCTGCAGCC
CTTATCAACA AAGCGCATCC AGCTATTAAA TTTATAGTTC CTGCCATTCC AGCGTTGAGG
GCAGGCATTG AGCACGCCGC CCGTGCCAGC GGCATGCAGG CGCATCTGCA AATCATTGCG
GGCCAGTCGC ACACGGTGCT GGCGGCTTGT GATGTCACCT TGATCGCCAG TGGCACTGCC
ACGCTGGAAG CGGCCCTGTT CAAGCGTCCG ATGGTGATCG CCTACCGCAT GGGTTGGCTC
TCCTGGCAGA TCATGCGGCG CAAACAGTTG CAGCCCTGGG TCGGTTTGCC CAATATTTTG
TGCCAGGATT TTGTCGTGCC CGAATTGCTG CAAGACGCTG CCACAGCACA AGCGCTGGCT
GACGCGGTGT TGCTCTGGAT CGATGCCAAG GCATCGCATC CTGCGAAAAT AGCGGCTCTG
CAACAAAAAT TCACCGCCCT GCACACAGAG TTGCAGCGCG ACACTCCTCG ATTGGCCGCC
CATGCGATCC AGCAAGTCCT CCAAGGCTGA
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| Protein sequence | MANQISQHLQ VALVAGETSG DLLAGLLLDG LREQWPLMTA VGIGGPQMAR RGLVAWWGHD
KLSVHGFGWE VLRRYREIVG IRRQLKTRLL RQQPDVFIGV DAPDFNLDLE QDLKAQGIKT
VHFVSPSIWA WRPERVEKIR RSVDHVLCIF PFEPALLARH GIAATYVGHP LANVIPMEPD
RSAARAALGL ADGDQVVAIL PGSRQSEINH LALRFFQAAA LINKAHPAIK FIVPAIPALR
AGIEHAARAS GMQAHLQIIA GQSHTVLAAC DVTLIASGTA TLEAALFKRP MVIAYRMGWL
SWQIMRRKQL QPWVGLPNIL CQDFVVPELL QDAATAQALA DAVLLWIDAK ASHPAKIAAL
QQKFTALHTE LQRDTPRLAA HAIQQVLQG
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