Gene Rfer_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1934 
Symbol 
ID3964116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2077101 
End bp2078567 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content59% 
IMG OID637916754 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_523191 
Protein GI89900720 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.226007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACAATA AGGCATTCGG CAATTACAAG GTCATCCCCA TCGTTCATCA AGAAGGCTTT 
GAGCCGCCGC GTCCGCCCGA ATCAGCGGAT GACGGCATGC TCTCCCTGTA CGCCTCGCAC
CAGACGATTT ATCCGCGCAG TGTCTCGGGC CTGTTCTCCA ACTGGCGCTG GGGCATGGTC
TGGCTGACCC AGATCATCTT TTACGGTCTG CCCTGGCTGG AGTGGGGCCA GCGCCAGGCC
GTCCTGTTTG ACCTGGCCTC CAGGCGCTTC TACATCTTTG GCCTGGTGCT GTACCCGCAG
GACTTCATCT ACCTCACCGG TATTCTGGTC ATCTCGGCCC TGTCGCTGTT TCTCTTTACG
GCAGTGGCCG GGCGCCTGTG GTGTGGTTAC GCCTGTCCAC AGACGGTCTA TACCGAAATT
TTCCTCTGGA TCGAGAAAAA GGTCGAGGGG GATCGCTCAG CGCGCCTGCG CCGCGACGCC
CAGCCTTGGT CGCTGGACAG GGGCATGCGC AAATCCACCA AGCATTTCCT GTGGCTGGCC
GTGGCGTTTT GGACCGGCTT TACCTTTGTC GGTTATTTCA CACCGATCAA ACAACATGGC
GTCGACCTCC TGCAGATGAG CATGGGCTCC TGGGAAGTGT TCTGGACCTT CTTCTATGGC
TTCGCCACCT ACGGCAACGC CGGCTTCATG CGCGAGCAGG TCTGCAAGCA CATGTGCCCC
TATGCGCGCT TTCAAAGCGC CATGTTTGAT AAAGACACGC TGATCGTCAC CTACGACACC
GAGCGCGGCG AGCCCCGCGG GGCCCGCTCA CGCAAGGCCG ATCCCGCCCA GTTGAACCTG
GGTGCCTGCG TCGATTGCAG CCTGTGTGTC CAGGTCTGTC CGACCGGCAT TGATATCCGC
AAAGGCCTGC AATATGAGTG CATCGGCTGT GGTGCCTGCG CCGATGTCTG TGACGAAGTG
ATGGACAAAA TGGGTTACGC ACGCGGCCTG GTCAAGTACA CCACCGAACA CGCCATGCAG
GAGCATTGGA CCCAGTCGCA AACCTTGCGT CACGTGCTGC GCCCACGCAT TCTGGTCTAC
ACCGCCATTC TGGCGACGAT TGTGATCGCG ATGGTGACCA GTCTGGCGCT GCGCAAACCG
TTCAGGGTTG ATGTGATCCG GGATCGCGGT GTCATGGCGC GCGTGGTCGA GGCGGGCAAG
ATTGAGAACG TCTACCGTCT GCAAGTCATG AACGCCACTG AAACGGATCA GCGCTTCAAA
GTCACGGTGT CTGGTCTACC TGGGCTTGAA GTAACCTCGG ACAACGAATT GACGGTACCC
GCAGCGCAGG CGCGCTGGCT GGTGGTGCGG ACCCAGTTGC CACCCGAAGT GGCGCCGCCC
GGCTCACATC CGATCAAATT CGAAATTGAA TCAATTGACA TGCATGTCCA TGATGCAGAA
AAATCCGTGT TTTTGGTGCC GCAATAA
 
Protein sequence
MNNKAFGNYK VIPIVHQEGF EPPRPPESAD DGMLSLYASH QTIYPRSVSG LFSNWRWGMV 
WLTQIIFYGL PWLEWGQRQA VLFDLASRRF YIFGLVLYPQ DFIYLTGILV ISALSLFLFT
AVAGRLWCGY ACPQTVYTEI FLWIEKKVEG DRSARLRRDA QPWSLDRGMR KSTKHFLWLA
VAFWTGFTFV GYFTPIKQHG VDLLQMSMGS WEVFWTFFYG FATYGNAGFM REQVCKHMCP
YARFQSAMFD KDTLIVTYDT ERGEPRGARS RKADPAQLNL GACVDCSLCV QVCPTGIDIR
KGLQYECIGC GACADVCDEV MDKMGYARGL VKYTTEHAMQ EHWTQSQTLR HVLRPRILVY
TAILATIVIA MVTSLALRKP FRVDVIRDRG VMARVVEAGK IENVYRLQVM NATETDQRFK
VTVSGLPGLE VTSDNELTVP AAQARWLVVR TQLPPEVAPP GSHPIKFEIE SIDMHVHDAE
KSVFLVPQ