| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1889 |
|---|
| Symbol | |
|---|
| ID | 3962267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2026526 |
|---|
| End bp | 2026987 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637916709 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_523146 |
|---|
| Protein GI | 89900675 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGG TCGTGGTTGA ACCAGCTGGT CCGGCGCTAC ACTGGTCGAC GAATTCGCTG
GAATACCAAC ACGAGAGCCG CCCATCCATG GACCACCCTT CCCCCAAATC CGTCTTGATC
GTCGACGACA GCCGTGTCTC ACGCTTGCTG ATCAGGTCCC TGATCCTGGC CCAGTTTCCG
CACTGGACCG TCACTGAGGC GGTAAGCGGA GACGAAGCGC TGGCACTGGC CGCGGCGCGG
CCCTTTGATT ACTGCACCAT GGACATCAAC ATGCCGGGCC TGCAGGGAAC CGAGGCCACC
GAGCAGTTGC TGAAAATGCA GCCGACCGTG CGCGTCGCCC TGTTCTCGGC GAATATTCAG
GAATCGCAAC AGATTCGCGC CACGCAGTTG GGTGCGCAGT TCGTGGCCAA GCCGGTGACC
CCCAAATCGG TGGCCCTGGC ACTGGCCTAT TTTCAGGGGT AA
|
|---|
| Protein sequence | MTLVVVEPAG PALHWSTNSL EYQHESRPSM DHPSPKSVLI VDDSRVSRLL IRSLILAQFP
HWTVTEAVSG DEALALAAAR PFDYCTMDIN MPGLQGTEAT EQLLKMQPTV RVALFSANIQ
ESQQIRATQL GAQFVAKPVT PKSVALALAY FQG
|
|---|
| |