| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1854 |
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| Symbol | |
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| ID | 3963029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1995526 |
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| End bp | 1996452 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916674 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_523111 |
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| Protein GI | 89900640 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACGT TGTTGTCCCG TCGCTGGCTG ATCCGCTGCA CTCCCATCCT GCTTCTTGCA
TCGGCCTCGG TATTTGCCCA AGCCCCTGTT CGCGTGGCGT CAAAAATTGA CACCGAGGGC
TCCTTGCTGG GCAATATGAT GATTCAGGTG TTGGAGGCCA ACGGCATCAA AACCGAGAAC
AAGGTGCAAC TGGGTGCCAC CAAAATCGTG CGCGGCGCCA TCACCGCGGG TGAGATTGAC
CTGTATCCGG AGTACACCGG CAACGGTGCT TTTTTCTTTT CCGATGAAAA AAACCCGGCC
TGGAAAAACG CCAAGGCGGG TTACGAGCTG GTGAAAAAGC TCGATGCCGA CAAAAACAAG
ATCGTCTGGC TGGAGCCCGC CCCGGCCAAC AACACCTGGG CCATTGCGCT GCGCCAGGAT
GTAGCCACCA GCAACAAAGT CAAGTCGCTC GCCGACTTGG GACCGTGGCT GGCCAAAGGC
GGCCAGTTCA AGCTGGCCGC TTCAGCTGAA TTTATCGAGC GCACCGACGC GTTGCCCGCG
TTCCAGACCG CCTATGGCTT CAAGCTCAAG CAGGACCAGC TCCTGACGCT GGCCGGCGGC
GACACCACCG TGACCATCAA GGCCGCCGCC CAGCAGACCT CGGGCGTCAA CGCCGCCATG
GCCTATGGCA CTGACGGCGC AATTGCCGCT TTGGGACTGG TGGTGCTGGA CGACCCCAAA
GGCATTCAGC CGATCTACGC GCCGGCACCG CTGATCCGCG CGGAAACGCT GGCACGCTAC
CCGAAGATCA GGGATCTGCT CGCACCGGTT TTCAAGACGC TGGACGGCCC GACGCTGCAA
GCGCTCAACG CAAAAATCGC GGTGGAAGGG CAAGACGCCA AAAAAGTGTC CGCCGATTAC
CTGCGGGCCA AGGGCTTCAT CAAGTGA
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| Protein sequence | MNTLLSRRWL IRCTPILLLA SASVFAQAPV RVASKIDTEG SLLGNMMIQV LEANGIKTEN
KVQLGATKIV RGAITAGEID LYPEYTGNGA FFFSDEKNPA WKNAKAGYEL VKKLDADKNK
IVWLEPAPAN NTWAIALRQD VATSNKVKSL ADLGPWLAKG GQFKLAASAE FIERTDALPA
FQTAYGFKLK QDQLLTLAGG DTTVTIKAAA QQTSGVNAAM AYGTDGAIAA LGLVVLDDPK
GIQPIYAPAP LIRAETLARY PKIRDLLAPV FKTLDGPTLQ ALNAKIAVEG QDAKKVSADY
LRAKGFIK
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