| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1832 |
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| Symbol | |
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| ID | 3961073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1969677 |
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| End bp | 1972325 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637916654 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_523091 |
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| Protein GI | 89900620 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACG AAAAAACACA AAGCAAGAAA CCTTCTCCGG TACCAGCTGA ACATTCCCCC
ATGATGGCCC AGTATTTCGG CCTCAAAGCT GACTACCCGG ACACCCTGCT TTTTTACCGC
ATGGGCGACT TCTACGAGCT GTTTTTTGCC GACGCCGAGA AGGCCGCGCG CCTGCTCAAC
ATCACCCTCA CCCAGCGCGG CCAGAGCGCC GGGCAGCCCG TGGTCATGGC CGGCGTGCCG
TTTCATTCCG TGGACACGTA TCTGGCCCGG CTCATCAAAT TGGGCGAATC AGTGGCGATT
TGCGAGCAGG TCGGCGAGGT GACCGGCAAA GGCCCGGTGG AGCGCAAGGT GGTGCGCGTC
GTCACCCCTG GCACGCTGAC CGATCTGGAA CTGCTAAGCG ATAAATCCGA GTCGATGCTG
CTGGCTGTGC ACCAGGGTCC GCGCAACACG TGCGGCCTGG CGTGGCTCAG CGTGACGCAG
GGCGAAGTGC ATCTGGCCGA GTGCGCGGTG GACGACCTGG CGCAGTGGGT GCTTCGCATC
GCTCCCGGCG AGATCATTTT CAGCGCGGGT ACGACACCGA CTTTTGAAGC GCGCCTGCGT
GGCGCGCCGC TCGCGGGCGC GGTATCTGTC AGCGTGCGGC CCGACTGGCA ATTTGACGCA
GGACTGGGTG AAAAAAAGCT GCTGGCCCAA CTACAAGCCG CCAGTCTGGC ACCGTGGCAG
GCGCAAGATT TGCCGCAGGC CCACGCCGCC GCCGCCGCCC TCCTGGGTTA CGCCGAGCAC
ACACAAGGCC AGGCGCTGAC CCATATCCAG AGTGTGCGAG TGCAGCGCAG CGACGAGTTG
ATCGACCTGC CGCCAACCAC CCGGCGCAAC CTGGAGCTCA CCCAGACTTT GCGCGGTGAA
GATCAACCCA CGCTTTTTTC TCTGCTTGAC ACCTGCATGA CTGGCATGGG CAGTCGCCTG
CTGAAGAACT GGTTGCTTGA ACCCCGGCGC GACCGTGGCG AGGCGCAGCA ACGCCTGAAC
GCCATCGCCG CCCTGCAAAG CGGTGACGCG CACACGTCGC GTGCGGGCGT CTGGCGCCAA
CTGCGCGAAC AACTCAAGGG CAGCACCGAC GTGGAGCGCA TCACCGCCCG CATCGCGCTG
CGCCAGGTGC GTCCCCGTGA ACTGGTCGCA CTCCAGTTAA CGCTACAAAA AACAGAGCTA
CTAACGCATA CAACACGGGG GCTAGAGGTC TATTTGACTC AAATATCTGG CCATTTGCTG
GCACCCGAAG CTTGTGCCGA CTTGTTGGCC CGCGCCATTG ACCCCGAGCC CGCCGTGCTG
GTGCGCGATG GCGGCGTGAT CGCCAGCGGC TTTGACGCCG AGCTGGACGA ACTGCGCGCC
ATTCAAACCA ATTGCGACGG CTTCTTGCTC GACTTGGAAG TGCGTGAAAA GGCCCGCACC
GGCATTGCCA ACTTGCGCGT GCAGTTCAAC AAGGTGCACG GCTTCTTCAT CGAGGTCACA
CAAGGGCAAG TCGACAAAGT GCCCGACGAC TACCGACGCC GCCAGACGCT GAAAAACGCC
GAGCGCTTCA TCACGCCCGA ACTCAAGGCG TTTGAAGACA AGGCCCTGAG CGCGCAAGAG
CGGGCACTGG CGCGTGAAAA ATGGCTGTAC GAGCAGGTGC TGGACCAACT GCAAGTGTTT
GTGCCCGCCC TCACCCGAGT CGCACGCGCC CTGGCCACGC TGGACGCGCT GTGCGCCCTG
ACTGAGCGCA GCCTGACACT GGATTGGTGC GCGCCGCAGT TTGTCAAAGA GCCGTGTCTG
GACATCACGC AGGGTCGCCA CCCGGTGGTA CAGGCCCGCC TGGCCGAGAC CAGCAGCGGC
GCCTTCATCG CCAACGACAC CCGCATGGGC CCGAAGCAGC GCATGCAGAT CATCACCGGC
CCCAACATGG GCGGCAAGTC CACCTACATG CGCCAGATCG CCGTGATCGT GCTGCTGGCC
AGCATGGGCA GTTATGTGCC GGCCAGCGCC TGCCGGCTGG GGCCGATCGA CGCCATCCAC
ACCCGCATCG GCGCTGCCGA CGATCTGGCC AACGCCCAGT CCACCTTCAT GCTCGAGATG
CTGGAGGCCG CGCAGATACT GATTGCTGCG ACGCCCAATT CACTGGTGCT GATGGACGAG
ATTGGCCGCG GCACCTCGAC CTTTGACGGC CTGGCGCTGG CGTCAAGCAT TGCCACCCAG
CTGCACGACA AAACGCAGGC CTACACCCTG TTTGCCACCC ACTACTTCGA GCTGACCGAG
TTCCCGGCCC AGCACCATGC AGCCATCAAC GTGCACGTGA GTGCCGCCGA GGCGGGCCGC
GACATTGTGT TTTTGCATGA AATCCAGCCA GGCCCCGCCA GCAAGAGCTA TGGCATCCAG
GTCGCGCGCC TGGCCGGCAT GCCGGCCGCC GTTCTGAACC AGGCCCGCCA GACGCTGGCC
GCGCTGGAAT CACAAGCGAC CCAAAATCAG GCCCAGGTCG ATTTGTTCGC CGCGCCGCCG
GCTACCGAAA CAGCAGCTGA CAGCGCCATC GAGACCGCCG TTGCAGCCCT GAATCCTGAC
AATTTAAGTC CGCGCGAGGC GCTGGAGGCG CTGTACCAGT TGAAGAAGCT GGCGTCTGGC
AAGGCATGA
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| Protein sequence | MQNEKTQSKK PSPVPAEHSP MMAQYFGLKA DYPDTLLFYR MGDFYELFFA DAEKAARLLN
ITLTQRGQSA GQPVVMAGVP FHSVDTYLAR LIKLGESVAI CEQVGEVTGK GPVERKVVRV
VTPGTLTDLE LLSDKSESML LAVHQGPRNT CGLAWLSVTQ GEVHLAECAV DDLAQWVLRI
APGEIIFSAG TTPTFEARLR GAPLAGAVSV SVRPDWQFDA GLGEKKLLAQ LQAASLAPWQ
AQDLPQAHAA AAALLGYAEH TQGQALTHIQ SVRVQRSDEL IDLPPTTRRN LELTQTLRGE
DQPTLFSLLD TCMTGMGSRL LKNWLLEPRR DRGEAQQRLN AIAALQSGDA HTSRAGVWRQ
LREQLKGSTD VERITARIAL RQVRPRELVA LQLTLQKTEL LTHTTRGLEV YLTQISGHLL
APEACADLLA RAIDPEPAVL VRDGGVIASG FDAELDELRA IQTNCDGFLL DLEVREKART
GIANLRVQFN KVHGFFIEVT QGQVDKVPDD YRRRQTLKNA ERFITPELKA FEDKALSAQE
RALAREKWLY EQVLDQLQVF VPALTRVARA LATLDALCAL TERSLTLDWC APQFVKEPCL
DITQGRHPVV QARLAETSSG AFIANDTRMG PKQRMQIITG PNMGGKSTYM RQIAVIVLLA
SMGSYVPASA CRLGPIDAIH TRIGAADDLA NAQSTFMLEM LEAAQILIAA TPNSLVLMDE
IGRGTSTFDG LALASSIATQ LHDKTQAYTL FATHYFELTE FPAQHHAAIN VHVSAAEAGR
DIVFLHEIQP GPASKSYGIQ VARLAGMPAA VLNQARQTLA ALESQATQNQ AQVDLFAAPP
ATETAADSAI ETAVAALNPD NLSPREALEA LYQLKKLASG KA
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