| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1717 |
|---|
| Symbol | |
|---|
| ID | 3962515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1853193 |
|---|
| End bp | 1854302 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637916540 |
|---|
| Product | protein of unknown function DUF513, hemX |
|---|
| Protein accession | YP_522977 |
|---|
| Protein GI | 89900506 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2959] Uncharacterized enzyme of heme biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCTG ATGCCAACGT CAACGCCGAC GCTACCGCCG ATACGCCGGC TCCTGGCGCA
ACGGACCTGC CTGCGGGCGT CGTTGCTGCG GTAGAGGCGC AACCCAGCGC GCTCAAGGCG
CCGGCGGTGC CGCGCTGGCA ACGCCTGGCG GGGCTGGCCA CCGCGGCTAC CGCGTTGCTG
GCTTTGCTGC TCAGTGGCTT GTTATGGCAA AAGCTGTCAT CCATGCAGGA ACAATTGGCG
CGCCAGAGTG CCGATGCCAG CGCCCAGTCG CTGGAGGCTC GCTCCACGGC CAAACTGGCG
CAGGAGTTGG CTCGCGAGTC GGCGGCGCGG GTGGCGGTCT TTGATGCGCG TTTGAGTGAG
ATCACGCTGC AACGCACCCA GCTGGAAGAG TTGATGCAAA GCCTGTCGCG CTCACGCGAT
GAAAATCTGG TGGTTGACAT TGAATCGGCC ATTCGCCTGG CACAGCAGCA GGCCCAGCTC
ACCGGCAGTA TCGAGCCCTT GCTGGCGGCT TTGAAAACCG CGGATCAGCG GGTGTCCAGG
GCCGCCCAGC CACGACTCAC GTCCTTGCAG CGTGCTGTCC GGCATGACAT TGACCGTGTC
AAGTCGGCGG TTGTGAGCGA CACGCCCGGC CTGTTGATGA AACTCGATGA GCTGGTGCGC
CTGGCCGATG AGTTGGTGCC GGCCAATGCC GTGGCGCCGG TGTCGGCCAC GGGCTCCATC
AAGCGTCAGA GTCTTGAGAC GCTGCCCACT TGGTGGCAGC GCAGTCTGCA GGTGGTGATG
ACCGAGGCAC GCAGCCTGGT TCGGCTCAGT CGTATCGAGC AGCCCGAGGC GGCCCTGCTG
TCGCCGGAAC AGTCGTTCTT TGTGCGGGAA AACCTCAAAC TGAAATTGCT CAACGCCCGC
CTGGGACTGT TGGCGCGGCA GATCGAGTCA GCGCAGGCCG ATCTGGCCGC GGCGCACCAG
ACGCTCAATA AGTACTTCAA CGCCACGTCA CGTAAGACGC TGACCGCCGT CGCCTTGTTG
CAGCAGGTGC AAAACCAGAT GAAGACGCTG CAATTGCCGC CGGTGGACGA AACGCTCGCC
GCACTGGCTA CGGCAGCTGC CGGAAGGTAG
|
|---|
| Protein sequence | MNSDANVNAD ATADTPAPGA TDLPAGVVAA VEAQPSALKA PAVPRWQRLA GLATAATALL
ALLLSGLLWQ KLSSMQEQLA RQSADASAQS LEARSTAKLA QELARESAAR VAVFDARLSE
ITLQRTQLEE LMQSLSRSRD ENLVVDIESA IRLAQQQAQL TGSIEPLLAA LKTADQRVSR
AAQPRLTSLQ RAVRHDIDRV KSAVVSDTPG LLMKLDELVR LADELVPANA VAPVSATGSI
KRQSLETLPT WWQRSLQVVM TEARSLVRLS RIEQPEAALL SPEQSFFVRE NLKLKLLNAR
LGLLARQIES AQADLAAAHQ TLNKYFNATS RKTLTAVALL QQVQNQMKTL QLPPVDETLA
ALATAAAGR
|
|---|
| |