| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1702 |
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| Symbol | |
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| ID | 3962499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1833111 |
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| End bp | 1834307 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637916526 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_522963 |
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| Protein GI | 89900492 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.16483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA ATGTGCAGTG GCGGCGTCGA CTTGTGCTTG GCCTGCTCGC CGTTCTCGTC
GCCTGGGGTT TGTTCCAGGG ATTTCGCCCC CAGGCGGTCG AAATGGACAT GGGTACCGCC
AGCCGTGCTG CGCTGCGGGT GACGCTGGAG CAGGAGGGGC GCACGCGGGT GCTTGACCGC
TACGTGGTCA CCGCGCCCGT GACAGGCTAC GCACGCCGGC TCCGGTCCGA AGTGGGCAAC
GCGGTCGAGC GCGGCGCCAT TCTGGTCGAG CTGGAGCCCC TGCGCGCCGA GGCGCTGGAC
CCGCGCCGCC GCGCCGAGGC CCAGGCCCGC ATCGCGGCCG CCGAGAGCGG CGTCAGCGCC
ACCGAACAGC GTGCCAGGGC TGCCGCCAGC AGTGCCGAGC TGGCGCAAAC AGAACTCCAG
CGCGTGCGCG CGCTGCGCCT GCAGGGGCAC GTCAGCGCCG CAGCCGAGGA CCGTGCCGCC
AGCGAGGTGC AGCGTAGCGC CGCGGATATG CGCTCGGCGC AATTTGCCGT CACCACCGCC
CGGCACGAAC TCGAGGCGGC CCGCACCACG CTGAAGTACG CCGGCAGCGC CAGCAACACC
GAGCCGGTGA CTGTCCGTGC GCCGGTGGCC GGGCGCGTGC TGAAGATTGC GCACAAGAGC
GAAGGCACGG TGGCCAGCGG CCAGCCGCTG GTCGAGATTG GGGACCCGGC TGCGCTGGAA
GTCGAAGTGG ACCTGTTGTC AGCCGATGCC GTGCGCATCC ATCCCGGCAC CCGCGTTGTG
TTTGAGCGCT GGGGCGGTGA GGGCTCGCTC GAGGGTGTCG TGCGTGTGAT TGAGCCCACT
GGCTTTACCA AGGTCTCGGC CCTTGGCGTT GAAGAACAGC GTGTCTGGGT CATCGTCGCC
TTCAGCTCAC CCGCCACCCA ATGGCAACGC CTGGGCGACG GCTACCGCGT CGAAGCCAGC
TTCATCGTGT GGGAAGGCAA GGACATCCTG CAAATCCCCG CCAGTGCGCT ATTTCGCGAC
GGCGACGGCT GGGCCGCCTT CGTGGTGGAG CAGGGCAAAG CCGTCAAACG CCGCGTCGAG
ATCGGCCAAC GCACCGGCCT GCGGGCCCAG GTCGTCTCCG GCATCCAGGC GGGCGAACGG
GTGATCAATC ATCCCGATGA CCGGGTGCGG GAGGGGGTGA GTGTGGTGGC GCGGTAA
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| Protein sequence | MKNNVQWRRR LVLGLLAVLV AWGLFQGFRP QAVEMDMGTA SRAALRVTLE QEGRTRVLDR
YVVTAPVTGY ARRLRSEVGN AVERGAILVE LEPLRAEALD PRRRAEAQAR IAAAESGVSA
TEQRARAAAS SAELAQTELQ RVRALRLQGH VSAAAEDRAA SEVQRSAADM RSAQFAVTTA
RHELEAARTT LKYAGSASNT EPVTVRAPVA GRVLKIAHKS EGTVASGQPL VEIGDPAALE
VEVDLLSADA VRIHPGTRVV FERWGGEGSL EGVVRVIEPT GFTKVSALGV EEQRVWVIVA
FSSPATQWQR LGDGYRVEAS FIVWEGKDIL QIPASALFRD GDGWAAFVVE QGKAVKRRVE
IGQRTGLRAQ VVSGIQAGER VINHPDDRVR EGVSVVAR
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