Gene Rfer_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1611 
Symbol 
ID3960475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1742091 
End bp1743053 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content62% 
IMG OID637916435 
Productradical SAM family protein 
Protein accessionYP_522873 
Protein GI89900402 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGACA CCCTCCCACT GTTGGAAAAA ACCCGCTTTC CGGTCATTCG CCGCACGCAC 
CTGGAAACCT TGCAGATCAA CCTCGGCTAC AAGTGCAACC AGAGCTGCGT GCATTGCCAC
GTCAACGCTG GCCCGAACCG TACCGAAATG ATGGACGTGG CCACCATGGC GCTGATTCCG
CAGGTGCTGG CCGCGCGCGA GATTGGCACA CTCGACCTGA CCGGCGGTGC GCCCGAACTG
CATGAGGGCT TCAGAGGCCT GGTGCGCGCG GCGCGGGCGC AAGGCGTGCG CGTGATTGAC
CGCTGCAATC TGACCGTTCT GTTTGAACCC GGGCAAGAAG GGCTGGCAGC GTTTCTGGCC
GCGCAGCGGG TCGAGGTTGT TGCGTCCATG CCCTGCTATT CGGCGGCCAA CGTTGACAAG
CAGCGCGGCG ACGGCGTGTT TGACCTGAGC ATTGCCGCCT TGCAGCAACT CAACGCCCTG
GGTTACGGCC GCCAAGGTTC GGGCCTGGTT CTGAACCTGG TCTACAACCC GCAAGGCGCG
TCGCTGCCAC CCGAGCAGCA GAAGCTGCAG GCCGATTACA AACGTGAGCT GCTCCAGCAC
TTCAGCATCG TCTTTAACGA ACTCTTTGCA CTGACCAACA TGCCAATCCA GCGCTTTGGC
TCGACGCTGG TGTCCAAGGG CACGTTTGAC GCCTACATGG ATTTGCTCAG GAGCAGTTTT
CAGGAACAGA ACCTGCCCGG TGTGATGTGC CGCAGCACGG TTAGCGTGGA CTGGCAGGGC
TGGCTGTCTG ATTGTGACTT CAATCAGCAG CTCGGCCTGC CACTCGGAAC ATCGGGACTC
AAGCGCCACC TGCGCGATCT GCTGAAAACC GGCCTGGACG AACAGACCAT CCGTGTGGCG
GGTCACTGCT TTGGCTGCAC CGCGGGCCAG GGCAGCAGTT GCGGCGGTGC ACTGGAACAT
TGA
 
Protein sequence
MHDTLPLLEK TRFPVIRRTH LETLQINLGY KCNQSCVHCH VNAGPNRTEM MDVATMALIP 
QVLAAREIGT LDLTGGAPEL HEGFRGLVRA ARAQGVRVID RCNLTVLFEP GQEGLAAFLA
AQRVEVVASM PCYSAANVDK QRGDGVFDLS IAALQQLNAL GYGRQGSGLV LNLVYNPQGA
SLPPEQQKLQ ADYKRELLQH FSIVFNELFA LTNMPIQRFG STLVSKGTFD AYMDLLRSSF
QEQNLPGVMC RSTVSVDWQG WLSDCDFNQQ LGLPLGTSGL KRHLRDLLKT GLDEQTIRVA
GHCFGCTAGQ GSSCGGALEH