| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1563 |
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| Symbol | |
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| ID | 3963270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1689163 |
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| End bp | 1690320 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916386 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_522826 |
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| Protein GI | 89900355 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTTG ACCTGAGTTG GATACTGCTG GGCCTGCCGC TGGCCTTTGT GTTGGGCTGG
GTCGCCTCGC GCCTGGATCT GCGCCAACTG CGCATTGAAA ACCATCAGGC CCCAAAAGCT
TACTTCAGGG GTTTGAACTT TTTGCTCAAT GAGCAACAGG ACCAGGCGAT TGATGCCTTC
ATCGAGGCCG TCCAAAGCGA CCCTGACACG TCCGAGCTGC ACTTTGCGCT GGGCAACCTG
TTTCGACGCC GTGGCGAATA TGAACGTGCG GTGCGCGTGC ATGAACATCT GTTGTCGCGT
GGCGACTTGA ACCTGCTTGA TCGCCAGCGT GCGCAGCACG CATTGGCACT GGACTATCTC
AAAGCTGGCC TGATCGACCG TTCTGAAGAG GCCTTGCTCA AGCTCGAAGG AACCCCGTTC
GAGGCGCAGG CGCGCCTCGC CCTGCTGGCC AACTACGAGC GCAGCCGCGA CTGGCTGCGC
GCCGCGCAGA TCGCGCAAAA ACTGGAACAC GCCAACCAGG GAAGCTTTCA GGGCCGTCTG
GCGCATTACC TGTGTGAGCA GGCGGCTGAA TCCCTCACTG CCCAAGAGCC TGAACAAGCC
AATTCTTTGT TGCAACAAGC TCTGAGCACG GCGCCAGACG CGGCACGACC CCCGATTGAC
CTGGCCCAGT TGTTGGCGCG CCAGGGCCAA CCCGAAGAAG CCTATTTGCT GCTCAAAAGA
TCTTTGCAGT CTGCGCCTGC GGCCACCCCC CTGATCGCAG CACCACTGAC CGACTACGCC
ATCGCTTGCG GGCGCGCCCC TGAAGCCCTG ACCTTGCTCA AGACCTCTTA CGCGCATTCC
CCCTCGCTGG ACGTGCTCGA TGCCATCGTC CTGCTGGAGG CCGGCCACGG CGGGCCCACG
CCCACTGCAC GTGACTGGTA TGTGCAGCAT CTGGAGCGCG AGCCGTCGCT GGTCGCTGCC
GCCAAGTGGC TTGCTGGTGA AAAACTCGAA CACGAGCAAT TTCATCCGCA GGTTCAACGC
GCACTGGAAC AGGCCATCAA GCCGCTCATG CGTTACCGTT GTGCTGCTTG CGGCTTCGAG
GCCAAGCAAC ACTTCTGGCA ATGTCCCGGC TGCCAGGCGT GGGACAGTTA TCCGGCCCGA
AGAATCGAGG AGCTATGA
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| Protein sequence | MDFDLSWILL GLPLAFVLGW VASRLDLRQL RIENHQAPKA YFRGLNFLLN EQQDQAIDAF
IEAVQSDPDT SELHFALGNL FRRRGEYERA VRVHEHLLSR GDLNLLDRQR AQHALALDYL
KAGLIDRSEE ALLKLEGTPF EAQARLALLA NYERSRDWLR AAQIAQKLEH ANQGSFQGRL
AHYLCEQAAE SLTAQEPEQA NSLLQQALST APDAARPPID LAQLLARQGQ PEEAYLLLKR
SLQSAPAATP LIAAPLTDYA IACGRAPEAL TLLKTSYAHS PSLDVLDAIV LLEAGHGGPT
PTARDWYVQH LEREPSLVAA AKWLAGEKLE HEQFHPQVQR ALEQAIKPLM RYRCAACGFE
AKQHFWQCPG CQAWDSYPAR RIEEL
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