Gene Rfer_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1434 
Symbol 
ID3963131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp1546525 
End bp1547082 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content59% 
IMG OID637916251 
ProductHNH endonuclease 
Protein accessionYP_522698 
Protein GI89900227 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.212887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGTCT TGAAGCTGTC AGCCCAGGGG CTGCCCCAAT CGTGGATTTC GCTGGAGCAG 
GCGGTGATTC ATTACGCCGC TGCCGAGGTG CGCTGGGAAA TGGGCGCGCA GATCGCCGTG 
TTTCACGGCG GGCACAACGC GCTGACCGGC GCGCAGTCCA TCATTACCGT CAACAGCATC 
ATTGGCACCA AGGGCGTGCC CAGCATCAAT CCTTTCCATC TCAAGCCGGG CCTGACCAAT 
GCCAAATTGT TCGCGCGTGA CCGCCAGCTT TGCGCCTATT GTGGTGAACA GTTTGACGAA 
GAAACCCTCA CTCGCGAGCA CATCATCCCG TTCGCACAAA ACGGCATCGA CACCTGGATG 
AATGTGGTGA CCGCCTGCCG CCCTTGCAAC CACCGCAAGA GCCACCGTAC TCCCGAGCAG 
GCGGGCATGC CGCTGTTGTA CGCGCCTTAT GTGCCCAGCC TGTGGGAAGA TTTCATTCTG 
CGCAACCGTC GCATTCTGGC CGATCAGATG GAGTTTTTGA TGGCGCATGT GCCCAGGTCA 
TCTCGGCTAC TGGATTGA
 
Protein sequence
MKVLKLSAQG LPQSWISLEQ AVIHYAAAEV RWEMGAQIAV FHGGHNALTG AQSIITVNSI 
IGTKGVPSIN PFHLKPGLTN AKLFARDRQL CAYCGEQFDE ETLTREHIIP FAQNGIDTWM 
NVVTACRPCN HRKSHRTPEQ AGMPLLYAPY VPSLWEDFIL RNRRILADQM EFLMAHVPRS 
SRLLD