| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1422 |
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| Symbol | |
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| ID | 3963196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1529404 |
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| End bp | 1530882 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637916239 |
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| Product | exoribonuclease II |
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| Protein accession | YP_522686 |
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| Protein GI | 89900215 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCCA ACCATTCCCA TCCCCACCAC CGCTCCGACC TCGTCCGCAT CGCCACCCGC
GCCATGTCCG AGCGTGGGCT TGAACCCGAG TTCCCGGCGC GTGTCGAGAC CGAACTGGCT
GCCATCAAAG GACCCGGCAG CGAGGTCGGT CCTGATATTC ACGATCTCAC TGATTTGCTG
TGGTGCTCCA TCGACAACGA CGATTCGCTC GATCTGGATC AGCTCACCGT CTGCGAGGTG
CTGGACCAAG GCGTGGTGAG GCTGTGGGTG GCCATCGCCG ATGTGGACGC GCTGGTCAAA
AAGGGCAGCG CCATTGATGG GCATGCGCTC ACCAACACGA CTTCGGTGTA CACGTCGGCC
CGCATTTTCC CGATGCTGCC CGAGCGCCTG TCCACCGATC TGACCTCGCT CAACTTTGCA
CAGGAACGGC TGGCGTTGGT GACCGAGATG GTCTTCAACG CCGACGCCTC GCTGGCGGGC
GCCACGGTGT ACCGGGCCCG GGTGCGCAAC AAGGCCAAGC TGGACTACGA CGCTGTCAGC
GCCTGGATTG AAAGTGACGG CGCACTGCCA GCCGCCGCGG CCGCGGTGCC GGGCATGGAG
GCGCAACTTC GCACACAGGA CGCGCTGGCC CAGCAACTGC GCGTGCGCCG GCGTCTAGAA
GGCTCGCTGG AGCTGGAGAC TTTCCAGCCG CGCGCCGTGT TTGACGGTGA GCAGGTGGTT
GATATTCGCC AGCAGGTGCA AAACCGCGCG CGTCAGTTGA TTGAGGAAGT GATGATTGCC
ACCAACGGCT GCACCGCACG CTACCTGGCA GGGCGGGGCG GCGCCTCGCT GCGGCGCGTG
GTGCGCTCGC CCGAGCGCTG GCTGCGCATC GTGGCCGTGG CCCAGGAGTA CGGCGAAACC
CTGCCGGCCG AGCCCGATTC CAAAGCGTTG GAAGCTTTTC TGGCCAAGCG CCACCAGGCC
GACCCGCTGC GCTTTCCTGA TCTGTCGCTT GTCATCGTGC GGCTCATGGG TTCGGGCGAG
TATGTGGTGG AAACGCCCGG TGGACCGCCG ATCGGGCACT TTGGCCTGGC TGTGCGCGAC
TACACCCACT CCACGGCACC GAACCGGCGT TTCCCCGACC TGATCACGTC GCGCCTGCTC
AAGGCGGCGC TGGCCGGCAA ACCGCAGCCG TATTCCAATG CTGAACTGGC CGAGCTGGCC
CTGCACTGCA CCCGGCAGGA AGACTCGGCC CAGAAGGTGG AGCGGCGCAT GCGCAAGTCA
GAGGCGGCAC TATTGCTGGA GTCCCACGTC GGCCAGCGCT TTGACGCCAT CGTGACCGGA
AGTACCACGG ACGGTATCTG GGTCCGGATT TTCACTCCGC CCGCCGAGGG CAAACTGGTG
CGTGGCAAAA CCAGCCTCAA GGTCGGCGAC AAGGTCCGCG TCAAGCTGGT GGCCACCGAC
GTGGATCGCG GTTTTATCGA TTTCGTAACG ACGGATTGA
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| Protein sequence | MNSNHSHPHH RSDLVRIATR AMSERGLEPE FPARVETELA AIKGPGSEVG PDIHDLTDLL
WCSIDNDDSL DLDQLTVCEV LDQGVVRLWV AIADVDALVK KGSAIDGHAL TNTTSVYTSA
RIFPMLPERL STDLTSLNFA QERLALVTEM VFNADASLAG ATVYRARVRN KAKLDYDAVS
AWIESDGALP AAAAAVPGME AQLRTQDALA QQLRVRRRLE GSLELETFQP RAVFDGEQVV
DIRQQVQNRA RQLIEEVMIA TNGCTARYLA GRGGASLRRV VRSPERWLRI VAVAQEYGET
LPAEPDSKAL EAFLAKRHQA DPLRFPDLSL VIVRLMGSGE YVVETPGGPP IGHFGLAVRD
YTHSTAPNRR FPDLITSRLL KAALAGKPQP YSNAELAELA LHCTRQEDSA QKVERRMRKS
EAALLLESHV GQRFDAIVTG STTDGIWVRI FTPPAEGKLV RGKTSLKVGD KVRVKLVATD
VDRGFIDFVT TD
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