Gene Rfer_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1401 
Symbol 
ID3962319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1512352 
End bp1512876 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content60% 
IMG OID637916217 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_522665 
Protein GI89900194 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTCA TTCGCCCCAG CCAAACTGAA GACATCCCGG CCATCGCCGC CATTTATGCC 
CGCCATGTGC TGCACGGCAC CGGCACCTTT GAGATTGATC CCCCCTCGCC AGACGACATG
GCGCAGCGCC GCGTTGACGT CCTGGCCAAG GGTCTGCCGT ATCTGGTTGC TGCAAAAGGC
GATCAGGTGA TGGGTTTTGC CTACTGCAAC TGGTTCAAGC CACGCCCGGC CTATCGATTC
TCGGCCGAGG ACTCGATCTA CCTGGCCGAT GAAGCCATCG GACAGGGCCT TGGACGCGCG
TTGCTGGCGG AACTGATGGC CCAGGCCGAA AAAGCAGGCG TACGAAAATT GATCGCGGTC
ATCGGCGACT CAGCCAACCA CGGATCGATC GGCGTGCACC GGTCTGCCGG GTTTTCCATG
GTCGGCGTGC TCAAATCATG CGGCTGGAAA TTTGATCAGT GGCTCGATGT GGTCATGATG
GACAAAGCCT TGGGTCTGGG CGCTACCCGC GCCCCGCAAA CATAA
 
Protein sequence
MTLIRPSQTE DIPAIAAIYA RHVLHGTGTF EIDPPSPDDM AQRRVDVLAK GLPYLVAAKG 
DQVMGFAYCN WFKPRPAYRF SAEDSIYLAD EAIGQGLGRA LLAELMAQAE KAGVRKLIAV
IGDSANHGSI GVHRSAGFSM VGVLKSCGWK FDQWLDVVMM DKALGLGATR APQT