Gene Rfer_1371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1371 
Symbol 
ID3960525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1479227 
End bp1479625 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content49% 
IMG OID637916188 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_522636 
Protein GI89900165 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.019268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATACGA CTGGATCGAC TTTCAAAGTT CTGGTGATTG ACGACAGCAA CACCATCCGG 
CGCAGTGCCG AGATTTTTTT GAAGCAAGGC GGACACGAAG TCATGCTGGC TGAAGATGGT
TTTGATGCCT TGGCAAAAGT CAATGACTAC CAGCCCCAGC TCATTTTTTG CGACATCCTG
ATGCCCAGAT TGGATGGCTA CCAGACCTGT GCGATCATCA AGCGAAATGC CAAGTATTCA
GACGTGCCCA TAGTCATGTT GTCGTCGAAA GACGGCGTTT TTGACAAAGC ACGCGGACGC
ATGGTCGGGG CGCAAGATTA CTTGACAAAA CCATTTACCA AAGACCAGTT ATTGCAAGCT
GTACAGCAGT TCGGCAAAGT GGCGCAAGGA GTTAACTGA
 
Protein sequence
MNTTGSTFKV LVIDDSNTIR RSAEIFLKQG GHEVMLAEDG FDALAKVNDY QPQLIFCDIL 
MPRLDGYQTC AIIKRNAKYS DVPIVMLSSK DGVFDKARGR MVGAQDYLTK PFTKDQLLQA
VQQFGKVAQG VN