| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1246 |
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| Symbol | |
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| ID | 3962023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1340840 |
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| End bp | 1341586 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637916060 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_522511 |
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| Protein GI | 89900040 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.245208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGTCAA GTTGGCTTAA GAGGTTCGAA GTGCGTTTCA TAAACAAAAA GGTGTTTGTA
ACCGGTGCTT CACGCGGCAT CGGTCAGGGC ATAGCAGAGG CATTTCGGGC TGAAGGGGCG
TGGGTCATTG GCACACGTAC TGGTGAACAA TGCGCGCCAG ACGAGGTATG CAATGAGTGG
TTCTCAGCAG ACTTTACCCA ACTTGAACAA ATTGCTGCTT GCGCAGAATT TGTGCGCAAA
ACTTCGCCCG ATGTGCTCGT TAACAATGCA GGCATCAACA AAAACGCCCC ATTTGTTGAC
ATTGATCCCG ACATGTTCCG GACTATTCAG CAGGTGAATG TCGTAGCGCC ATTCATGCTT
TGCCAGGCTG CCATACCTTC CATGAAGCAA AAGGGCTGGG GTCGCATCGT CAACATATCA
TCCATCTGGG GCAAGATCAG CATGGCCCAT CGAGCCTCTT ACTCTGCCAG TAAATTTGCA
CTCGATGGCA TGACAGTGGC GCTGGCCGCT GAGCACTCAA TAGACGGCAT TATTGCCAAC
AGCATTGCCC CTGGCTTTAT TGACACCGAC CTCACTCACC ATATGCTGGG CGATGCGGGT
ATCAAAGCAT TGGTTTCCAA AGTGCCTGCC AACCGCTTGG GCCAGGTGTC AGAAATTGCA
CGTCTGGTTT TATGGCTTGC CAGTGAAGAA AATACCTTTA TTGCCGGACA AAATGTTGCT
ATTGATGGGG GGTTTACACG TGTCTGA
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| Protein sequence | MWSSWLKRFE VRFINKKVFV TGASRGIGQG IAEAFRAEGA WVIGTRTGEQ CAPDEVCNEW
FSADFTQLEQ IAACAEFVRK TSPDVLVNNA GINKNAPFVD IDPDMFRTIQ QVNVVAPFML
CQAAIPSMKQ KGWGRIVNIS SIWGKISMAH RASYSASKFA LDGMTVALAA EHSIDGIIAN
SIAPGFIDTD LTHHMLGDAG IKALVSKVPA NRLGQVSEIA RLVLWLASEE NTFIAGQNVA
IDGGFTRV
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