Gene Rfer_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1214 
Symbol 
ID3963539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1299645 
End bp1301132 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content54% 
IMG OID637916028 
Producthypothetical protein 
Protein accessionYP_522479 
Protein GI89900008 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACGGT TCTGCTACGC ACGCCCGAGC GTTGTCATCC GTGATTCGCT CTTTGTGCGC 
ATTGGGTCCA AGCAATTCCA AAATTTCATC GGAAGGAACT ACGGTATGAC TATGCTGTTC
AGGCCAACGC CATTGCCCGA AGAATTGGAT CGAGGTTATC TGGGTCGCAT CAAGCGGATA
AATGGCTTTC AATCCGAAAA AGAAACCGTC GCAGCCATGA TCAGTCAATT CGGGATGCAG
CTCATTTCTC GGCGTGAGCT CTCATGTTTG GAGTTACTCA GTTTGATGGC AAACCAGCCG
CTAGAGCAGT TCGCTAGGTA TCACTCAACC ATTCCGATCA GGCGCGCTAT CACGTCCTCT
TTGCCGGATC TCCCGCATGG GAGCACGACA CGACGTTCGC TTTTATGTAA CTTCGGTATG
GTCGCCGTTC GCCCTGGAGC ATATTTTTGC ACCAAGTGTG TGTCCGAAGA TGTGGCGTTC
CATGGTGTTA GCTATTGGCG TCGCGACCAT CAGGTACCCG GTCAGCTTTG GTGCCCTAAG
CACGTAATAC CCCTCAACTA TCTGGAAAAC GATGAAGCCT TTCTACGGTC TCCGTCAAAC
TGTATTGCAG ATGCTGAAAC CGTCCCAGCG GCGTGGGTTG ACGGGGCTCG GGACAACGAG
CATGTGAGTA GGTTCACTGG CATAGCGTCC GGGTTGTTCG AGCGCACATC TCCGCTTGAC
GTCAAATTCG TGGCGCTTGC GTTGCGCAAG CGAGCGATGA GCCTGGGATT AAATACCGTC
GCGACCCCAG TTAAAAATAA ACCGTTGCTG AGTGACCTCA TTCGAGATTC GTTCCCAGCT
CCTTGGCTGG CGACGGTATT CCCGAGCCTC GTAGACAAAG TCAAAGGGCA GATTCTGAAC
CGGGTTGACG GTGTTCTCTA TATGGCCACC TCCGCGTCAT CGGTTTGGTC ATATATTCTG
GCCGCATCAG TTTTGTATGC ATCGGCCGAC GAAGCGCTAA ATGGCCTCTT TTCAGCTCGC
AAGGACTTTA TCGATGAGCC AAAGCGGAAG AGGAGCGCGC GCGGTACTTT AGATAGACAA
GTGCTTGTTA CTGCGTACAT CGAGTGCAAA GGTCGCCAAG TCCTTGTGGC CGAGCGCTTG
GCATTGCCTC TTCATCAGGC AGTTTCTATG CTTCGTGAGG CGGGGCTTCC GAACCTGGTT
CTCGGTCGCT CCGACGGGAA AAATTCGACA GCTGCTGCCG ATGCGTTTTA CCTTGATGAA
AAGTCGTTCG ACGAAAGCGC ACGTGCTGGG GGCTTGACGG CCTCTGAAAT GGCGGCACTT
GTTCGATGTT CCGGTGTGGA TTTCAAATCG ACGCTGTCAG CGATGGCCGG GCAGCGGTCA
ACGCGAGGTA CCGGCGTAAG GCGTACAAGA GGGTTAATGC CGCAGGAAGC GAGAAATTAC
TTCGAAAAAT CCACAGGGGA AACTGGACAC CCGTCCGGAT CAGTCTGA
 
Protein sequence
MERFCYARPS VVIRDSLFVR IGSKQFQNFI GRNYGMTMLF RPTPLPEELD RGYLGRIKRI 
NGFQSEKETV AAMISQFGMQ LISRRELSCL ELLSLMANQP LEQFARYHST IPIRRAITSS
LPDLPHGSTT RRSLLCNFGM VAVRPGAYFC TKCVSEDVAF HGVSYWRRDH QVPGQLWCPK
HVIPLNYLEN DEAFLRSPSN CIADAETVPA AWVDGARDNE HVSRFTGIAS GLFERTSPLD
VKFVALALRK RAMSLGLNTV ATPVKNKPLL SDLIRDSFPA PWLATVFPSL VDKVKGQILN
RVDGVLYMAT SASSVWSYIL AASVLYASAD EALNGLFSAR KDFIDEPKRK RSARGTLDRQ
VLVTAYIECK GRQVLVAERL ALPLHQAVSM LREAGLPNLV LGRSDGKNST AAADAFYLDE
KSFDESARAG GLTASEMAAL VRCSGVDFKS TLSAMAGQRS TRGTGVRRTR GLMPQEARNY
FEKSTGETGH PSGSV