| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1191 |
|---|
| Symbol | |
|---|
| ID | 3963516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1277199 |
|---|
| End bp | 1278314 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637916007 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_522458 |
|---|
| Protein GI | 89899987 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.991338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAG AAGACTTCCT GCTAGGCATG GGTGCCGACA CATCATCGGC ACAGAACCTG
TCCATGCGAC TGAGCACGGC GGACATAGAA GCCATGAACA CGGGCATGCT CGAGGAACTG
GGCCTAACCA AGCGCGCAAC TCAGGCCATT AAAAACAAGC GGCCGCCGAT CCCTGTAAAA
AACCTGAGAT CGGTTCTCGA CGCAAACTTC TACGTATGTT GTGTCTGCAA AGACCGGAAC
CGCAATGTTG TTGTGCACCA TATCCAACCA TACGCTCAAT CGAAGGATCA TGCTTGCTCG
AATCTGGCTG TGCTTTGCCT CATGCATCAT TCGGAAGAGC ACCTGACGCG CGATCAAACC
CAGAACCTGA CCTCGGACAA GATCGCGTCC TGCAAGAAGT CCTGGGAAGC AGAAACCATT
CGAATAAAGG CAGACATTGC GACGGCGCAG CGGGAGCGTC CGTGGAATGA ACCTTGTAGG
TGGGATTGGG TTAACTTTCC TCGCGTGGTC GACACCCTTA GGCTCAAAGG GTTGAAGGCT
GCCGATGGCT ACGGCTACGA CGAGTTATTC AAAAGCGGAA TTGTCGACAA GTCCGGAGGA
TTCGTCGGTA CCGATTGGCA GAATGTGAAA GTCAAGGACA ACGACTATTT CAGCGCGGGC
AAGCAGCAGC TTGAGATTGC TGCTCACGTG GGGCAAATGC TCGAGCTAAT CGGACAGGCG
GTGCCCATTT TCGATTTAAC CTCTTGGCTG TCGATATGTC CCAGTTTCAT TCGAGGCTGT
CTAGTCGAAG GTGACTTCAT CTCCGTGAAG GCGTCGTTTG TCTATCACAA AGCCTTCGAC
GGCGCGATGA TCGCAACCGC CGAAACGGAA GCTTGGCGCA TCTCGTTCGA GTTCGATCCA
TGGTACTGCC TCAGCAGCAC CTCCCGGCTC AACTACTACA CTACAACGCC TGTGAACCAA
TCCCTGTTCG GAATCGTTCG GTCAGTGGTA TCCCAGGGCG GCAAGCAAGT TCTCAGCATT
TCTCCGCTGG GCACAAGCCC AACTTTCGCG CCGCATAGGC CAAGATTCGG AGATTGGATC
GATGGAACTC GGCCGACCGC AGACGGTGGG ACGTAA
|
|---|
| Protein sequence | MTTEDFLLGM GADTSSAQNL SMRLSTADIE AMNTGMLEEL GLTKRATQAI KNKRPPIPVK
NLRSVLDANF YVCCVCKDRN RNVVVHHIQP YAQSKDHACS NLAVLCLMHH SEEHLTRDQT
QNLTSDKIAS CKKSWEAETI RIKADIATAQ RERPWNEPCR WDWVNFPRVV DTLRLKGLKA
ADGYGYDELF KSGIVDKSGG FVGTDWQNVK VKDNDYFSAG KQQLEIAAHV GQMLELIGQA
VPIFDLTSWL SICPSFIRGC LVEGDFISVK ASFVYHKAFD GAMIATAETE AWRISFEFDP
WYCLSSTSRL NYYTTTPVNQ SLFGIVRSVV SQGGKQVLSI SPLGTSPTFA PHRPRFGDWI
DGTRPTADGG T
|
|---|
| |