10 homologs were found in PanDaTox collection
for query gene Rfer_1185 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_1185  hypothetical protein  100 
 
 
240 aa  492  9.999999999999999e-139  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2305  hypothetical protein  64.13 
 
 
263 aa  290  1e-77  Polaromonas sp. JS666  Bacteria  hitchhiker  0.00127584  normal 
 
 
-
 
NC_008781  Pnap_1706  hypothetical protein  63.23 
 
 
278 aa  286  1e-76  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3203  hypothetical protein  59.64 
 
 
310 aa  267  1e-70  Variovorax paradoxus S110  Bacteria  normal  0.357564  n/a   
 
 
-
 
NC_010524  Lcho_0308  hypothetical protein  44.44 
 
 
282 aa  190  2e-47  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008752  Aave_0184  hypothetical protein  38.87 
 
 
302 aa  169  3e-41  Acidovorax citrulli AAC00-1  Bacteria  normal  0.276788  normal 
 
 
-
 
NC_008825  Mpe_A0910  hypothetical protein  36.74 
 
 
270 aa  151  8.999999999999999e-36  Methylibium petroleiphilum PM1  Bacteria  normal  0.406985  normal 
 
 
-
 
NC_010679  Bphyt_7383  hypothetical protein  31.58 
 
 
221 aa  93.2  3e-18  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00987658  normal 
 
 
-
 
NC_007950  Bpro_5424  hypothetical protein  26.29 
 
 
261 aa  79.7  0.00000000000004  Polaromonas sp. JS666  Bacteria  normal  0.232144  normal 
 
 
-
 
NC_007794  Saro_0242  hypothetical protein  31.34 
 
 
167 aa  47  0.0003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
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