Gene Rfer_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1154 
Symbol 
ID3963460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1239005 
End bp1239493 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content56% 
IMG OID637915970 
ProductMarR family transcriptional regulator 
Protein accessionYP_522421 
Protein GI89899950 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGAG TCGACCAAAA CAGTAGCCAG CCACAGACAA CGGCCCAAGT CCTTCGCCGT 
TTCAGGCTGG TTTTCAACGC CGTGAAAACG CACTTCCAGC AGGTGGAGAA AAGTGCAGGG
GTCGGAGGCG CGCAACTGTG GGCACTAAGC GTGATACATG CCGAGCCAGG CATTGGTGTC
AACGATCTGG CAAAGTCCAT GGACATACAC CAGACGACAG CCAGTAATCT GGTGAAGGCG
TTGGTGAAGA TGGAAATGGT TCAGACCGAT AAAATCGGAC CTGACCGTCG AGCGGTGCAA
CTTTATGCGC TCCCTGCTGG GCAGCGAGTG CTCAAAAAAG CCCCTGGCCC GTTTGCAGGG
GTTCTGCCGC AGGCGCTTTC TCAACTGGAC ACAGCCACAT TGACGCGATT GGACCATGAT
CTCGGCTTAC TCCTTGCGCT CCTAGATGCG GATGAAAATG CGGCCAACAT CCCACTAGCA
GACATGTAG
 
Protein sequence
MPRVDQNSSQ PQTTAQVLRR FRLVFNAVKT HFQQVEKSAG VGGAQLWALS VIHAEPGIGV 
NDLAKSMDIH QTTASNLVKA LVKMEMVQTD KIGPDRRAVQ LYALPAGQRV LKKAPGPFAG
VLPQALSQLD TATLTRLDHD LGLLLALLDA DENAANIPLA DM