Gene Rfer_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1080 
Symbol 
ID3963503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1154951 
End bp1155853 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID637915901 
Producthypothetical protein 
Protein accessionYP_522352 
Protein GI89899881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT CGCTTTCATT GCGCCACTTC CTGTTGGCGC TGGCGGTAGT GGCGGTCTGG 
GGCACCAATT TTGTTGTCAT CAAACTCGCT CTGGGCCAGA TGCCGCCCCT GTTGTTTGCC
ACCTTGCGCT TCGCCGTGGT GGTGGTGCCA ACAGTGTTCT TTTTGCCGCG GCCAAAGGTG
CCGTGGCGCA ACCTCGCCGC TTACGGCCTG CTGATCGGCG TGGGCCAGTT TGGCCTGCTG
TTTATCGCCA TGAATGGTCA TATTTCGCCC GGCCTGGCTT CGCTGGTGAT CCAAGTTCAG
GTGTTCTTCA CCATCGGGCT GGCGATGCGA CTGGCCGGCG AACAGCTGCA ACGCATGCAG
TGGCTGGCAT TGGCTTTGGC CAGCGCTGGT ATTGGCATCA TCGTGCTGCA TACCGATGGC
AGTACCACGC TGCTGGGGCT GGCGCTGATT CTGCTGGCCG CGCTGGCATG GGCGGGGGGC
AACATCGTGG CGCGCGAGGC TGGGCGCGTC AATATGGTGG CGTATGTGGT GTGGTCGAGT
CTGTTTGCCG TGCCGCCGCT GGCGGCGCTC TCCTTGTGGG TTGAAGGTTG GGACGCGGTG
GCTGCGGGCC TGCGCGGCGC CGATGCGGTG GTTTGGGCCG CGGTGGCGTG GCAGGCCTGG
GGCAACTCGC TGTTTGGCTA CGCCGCCTGG GGCTGGCTGC TGGCACGCTA CCCGGCCGCC
ACCATCACAC CGATGGCGCT GCTGGTGCCT TTGTTTGGCA TGGGCGCCGC CGCGCTCTGG
CTGGGAGAAG GCTTGCCGGG TTGGAAACTC AGTGCCGCCG CGCTGGTCAT GGGCGGCCTG
GCCCTGAATC TGCTGTGGCC CAAGTGGCGC CAGTGGCTGC GCCAGCGCCC GGTGGCGAAT
TGA
 
Protein sequence
MKNSLSLRHF LLALAVVAVW GTNFVVIKLA LGQMPPLLFA TLRFAVVVVP TVFFLPRPKV 
PWRNLAAYGL LIGVGQFGLL FIAMNGHISP GLASLVIQVQ VFFTIGLAMR LAGEQLQRMQ
WLALALASAG IGIIVLHTDG STTLLGLALI LLAALAWAGG NIVAREAGRV NMVAYVVWSS
LFAVPPLAAL SLWVEGWDAV AAGLRGADAV VWAAVAWQAW GNSLFGYAAW GWLLARYPAA
TITPMALLVP LFGMGAAALW LGEGLPGWKL SAAALVMGGL ALNLLWPKWR QWLRQRPVAN