Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0843 |
Symbol | |
ID | 3964066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 881074 |
End bp | 882240 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637915672 |
Product | mandelate racemase/muconate lactonizing enzyme |
Protein accession | YP_522123 |
Protein GI | 89899652 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.144332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATTA CTGCCATCCG TGAAGCTACC AAACCCATCA AATCCGACAT CCGCAACGCG TACATCGACT TTTCAAAGAT GACACTGAGC CTGGTGGCGG TCGTCACCGA CGTCATCCGT GACGGCAAAC CTGTGATCGG CTACGGCTTC AACTCGAACG GCCGCTACGG CCAGGGCTCG CTGATCCGCG AACGGTTCGC CCCGCGCATC CTCGAAGCGT CTCCAGAGAG TCTGGGAGAC GACAGCGGAA ACAACCTCGA CCCCCACAAG ATCTGGACAA CCATGATGAC CAATGAAAAG CCCGGTGGTC ATGGCGAGCG CTCGGTTGCA GTGGGCACGA TTGACATGGC GGTGTGGGAC GCGGTCGCCA AGATCGAAGA CAAACCACTT TACCAACTGC TTGCTGAACG CTATGGTGAC GGCCGGCCCA AGCGCAAGGT CTTCGTCTAT GCGGCCGGCG GGTACTACTG GCCCGGCCAG GGGATTGAAG GGCTGGAGCG GGAAATGCGC AGCTACCTTG ACCGCGGATA TTCCGTGGTC AAAATGAAGA TTGGCGGCGC ATCTCTCAGC GAAGACTGCA AACGCATTGA GGCCGTGCTG AGACTGTTGG GACCTGGCCA GAAACTGGCC GTGGATGCCA ACGGCCGATT CGACTTGAAG ACGGCCGTCG AATACGCCAA GGCGCTGTCG AACTACGGCC TGTTCTGGTA CGAGGAAGCC GGTGATCCGC TTGACTATGC CCTGCAGGCA GAACTCGCCC AGCACTACGC CGGGCCGATG GCCACCGGCG AAAATCTCTT CTCGATGCAG GACGCGCGCA ACCTGATTCG CTACGGTGGT ATGCGGCCTG ACCGTGACTG GCTGCAGTTT GACTGCGCTC TGAGCTACGG CCTCGTGGAA TACCTGCGCA CCCTGGAGAT GCTGAAAGAG CACGGCTGGT CGACCTCGCG CTGCATCCCG CATGGCGGAC ATCAGATGTC ACTGGCTATC GCCGCAGGTC TCGGCCTTGG CGGCAATGAG TCCTACCCCG ACTTGTTCCA GCCCTACGGT GGCTTTCCTG ATGGGGTGAA GGTCGAAAAC AGCTACGTCA CCTTGCCGGA GCTGCCCGGC ATCGGCTTCG AAGGCAAAGC GGATCTTTAT CGCGAGATGA GTGCCCTTGC CAGCTGA
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Protein sequence | MKITAIREAT KPIKSDIRNA YIDFSKMTLS LVAVVTDVIR DGKPVIGYGF NSNGRYGQGS LIRERFAPRI LEASPESLGD DSGNNLDPHK IWTTMMTNEK PGGHGERSVA VGTIDMAVWD AVAKIEDKPL YQLLAERYGD GRPKRKVFVY AAGGYYWPGQ GIEGLEREMR SYLDRGYSVV KMKIGGASLS EDCKRIEAVL RLLGPGQKLA VDANGRFDLK TAVEYAKALS NYGLFWYEEA GDPLDYALQA ELAQHYAGPM ATGENLFSMQ DARNLIRYGG MRPDRDWLQF DCALSYGLVE YLRTLEMLKE HGWSTSRCIP HGGHQMSLAI AAGLGLGGNE SYPDLFQPYG GFPDGVKVEN SYVTLPELPG IGFEGKADLY REMSALAS
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