Gene Rfer_0754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0754 
Symbol 
ID3960157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp788926 
End bp789438 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content63% 
IMG OID637915584 
ProductSmpA/OmlA 
Protein accessionYP_522035 
Protein GI89899564 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTCTGA TTTTTGCCGC CAGCGCCAGC CTGGTGGCTT GTGGCAGTCT GAATGGCGCC 
AGTACCAGCA TCGCCAGTAT CGTGACGCCC TACAAGATTG ACATCGTTCA AGGCAATTTT
GTGTCCCAGG AGCAGGCCGC TGCGGTCACA CCGGGCATGA GCCGTGTGCA GGTCCGCGAT
ATTCTGGGCA CGCCCTTGTT GAGCAGCATC TTCCACGCTG ACCGCTGGGA CTATGTCTTC
ACTTTCAAAC GCCAGGGCCT AGCGCCACAG GCGCGCAAAG TCACCGTGTT TTTCAAGGAT
GATGCGCTGG AGCGCATCGA GGCCGATGCC TTGCCGACCG AAGCCGAGTT CGTGGCCTCG
CTCGATTCAG GACGGCAAGC CGGCAAAGTG CCGGTGCTGG AAATGCCGCC AGAGAGTCTG
ACGGCGGCGC CGGCCCCGAT AAAAACGGTC GAGCCAACGC CGCTGCCGCC GCTGCCCGCG
AGCTATCCGC CGCTGGAGCC GGTGGCCCGC TAA
 
Protein sequence
MGLIFAASAS LVACGSLNGA STSIASIVTP YKIDIVQGNF VSQEQAAAVT PGMSRVQVRD 
ILGTPLLSSI FHADRWDYVF TFKRQGLAPQ ARKVTVFFKD DALERIEADA LPTEAEFVAS
LDSGRQAGKV PVLEMPPESL TAAPAPIKTV EPTPLPPLPA SYPPLEPVAR