| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0658 |
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| Symbol | |
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| ID | 3963843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 681878 |
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| End bp | 682444 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637915489 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_521940 |
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| Protein GI | 89899469 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | [TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.308974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTGGCCG CTTGCGCCAG CTCTTCAGCC TACCCGCCTG CGCCAATGGG TGCAGCCACA
ACAGATTACA ACTATGTGGT GGGTGCTGGC GACACGCTCA ACATCATCGT CTGGCGCAAT
CCTGAGCTTT CCATGTCGGT GCCGGTTCGT CCGGATGGCA AGGTGTCAAC ACCACTGGTG
GATGAGTTGG TGGCCCAGGG CAAGACTTCG GTCGAGATTG CTCGTGATGT GGAGAAGGCC
TTGAGCAAGT TGGTGCGTGA CCCGGTCGTG ACGATCATTG TGACCAGCTT TGTCGGACCC
TACAGCGAGC AAATTCGGGT TGTTGGCGAG GCCGCCCGAC CTCAGGCCCT GCCGTACAAA
CAAAAAATGA CGGTGCTCGA TGTGATGATT GCCGTGGGTG GCCTGACCGA TTTTGCCGAT
GGCAACGCGG CTTCCATCAC ACGTGCTTCA GAGGGCGACA AGCGCTATTC GGTGCGACTC
AAAGACCTGG TCAAGCGCGG CGATATCTCT GCCAATGTCG AGATGAAACC TGGCGATGTT
CTGATTATTC CGCAAGGCTG GTTTTAA
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| Protein sequence | MVAACASSSA YPPAPMGAAT TDYNYVVGAG DTLNIIVWRN PELSMSVPVR PDGKVSTPLV
DELVAQGKTS VEIARDVEKA LSKLVRDPVV TIIVTSFVGP YSEQIRVVGE AARPQALPYK
QKMTVLDVMI AVGGLTDFAD GNAASITRAS EGDKRYSVRL KDLVKRGDIS ANVEMKPGDV
LIIPQGWF
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