Gene Rfer_0632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0632 
Symbol 
ID3963912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp656799 
End bp658286 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content58% 
IMG OID637915462 
Productflagellar hook-associated 2-like 
Protein accessionYP_521914 
Protein GI89899443 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.685512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCA TTTCATCAAC CGGCATTGGC AGCGGGCTGG ACGTCAACAG CATTGTTTCT 
CAGCTGGTAG CGCTGGAGAA GACGCCGCTC AAAACGCTGG CGCTCAAAGC GACCAACACG
CAAAACCAGA TATCTGCCTT TGGCGAGATT CAGTCGCAAT TTGCCGCACT GACCGACGTG
GCCAGCCGCA TTTCGGTGGC CAGTACATGG GGTGCGCGCA ACGCGTCATC GTCCAACACC
AGCGCCGCCA CCATCACGGC GACAGGTACC GCCAATGCCA CCTCTTTCAG TCTGGATGTG
GATCAGCTGG CGCGATCGCA GTCGGGTTCA TCAGCCGCCG TGGCGCCCGG CACCATGCCA
GGGGCGGGCA CGCTGACGCT GCAACTGGGC ACGTGGACTG CGGGCGGCGC GGCGTTTACA
CCAGGCGCGG CTGCCAGTGT CAATGTGACT GTTCTGGCGA CCGACACCAT TTCGGACATC
GCGTCCAAGA TCAATGGCGC CAACGCTGGC GTTGTGGCGA CTGTTTTCAA TGACGGCACC
AATGAGCGCT TGCTGTTGCA ATCCAAAACT ACCGGTGCGG CGGCGGGTTT CAGAATGACG
GTGGCCGACG CCGATACGAC CAACAACGAC AACGCGGGTT TGTCGCGCTT GTCCTTTGAT
CCCGCGACTG TTGATCCATT GACCGGCCTC GCTTCTGGCA TGGCTACAGC GGGTATTCCG
GTGCAATATG CCCAAGACGC GAAGGCCCGC ATCAACGGTC TGGCCGTCAC CTCGGCCACC
AACACGCTGA CTGACAACAT TCCGGGTGTC ACTATCAAAT TGGTGGCGAC AACGACCACC
GGCTATGGCC TCCCGGGTGA GGTCAAGTCA CCGCTGACCA TGGCGATCAG CGAAGACGTG
ACGCCGGCGG TCAAAAATGT GTCGGACTTT GTGACCGCTT ACAACAAGTT GAATAAGTCG
CTGACTGATT TAACGAAATA CGACGCTGCT ACCAAGACGG CCGGGCTGTT CCAGGGCGAT
TCCTCGGTGG TGGGGCTGCA AAATATATTG CGCAATATGC TCGGTTCTGC CAGCTTGGGC
GCTAGTTCCC AGCGCTTGTC AGATGTGGGG CTGGAGCGGC AGCTGGACGG CTCACTTGTC
ATCAATACCG CCAAGTTGAG CGCGGCCGCC AATAACGGCA CCACCTTGCA ACAGCTTTTT
ACCAATGACA ACAAAGACCC GTTGACCAAC GGTTTTGCCT TGAAATTCAG GGATCTGGGG
CGTGGTGTTG CGTCAAGCGG TGGCTCAGTC AAGAATAAGG CGGAGGCGCT ACAAAAAAAT
CTTGACAACA ACACCAAAGA ACAAACCAAG GTGAATGACC GCGCCGCCCT GTTCGAAACC
CGTTTGCGCA AGCAGTACAG CGCGCTGGAT GCCCAGATGG CGCAACTGAA CGCGCTCAAT
GCTTATGTGA CCCAGCAGGT GGCAACCTGG AACAAGTCAA CCGCCTGA
 
Protein sequence
MATISSTGIG SGLDVNSIVS QLVALEKTPL KTLALKATNT QNQISAFGEI QSQFAALTDV 
ASRISVASTW GARNASSSNT SAATITATGT ANATSFSLDV DQLARSQSGS SAAVAPGTMP
GAGTLTLQLG TWTAGGAAFT PGAAASVNVT VLATDTISDI ASKINGANAG VVATVFNDGT
NERLLLQSKT TGAAAGFRMT VADADTTNND NAGLSRLSFD PATVDPLTGL ASGMATAGIP
VQYAQDAKAR INGLAVTSAT NTLTDNIPGV TIKLVATTTT GYGLPGEVKS PLTMAISEDV
TPAVKNVSDF VTAYNKLNKS LTDLTKYDAA TKTAGLFQGD SSVVGLQNIL RNMLGSASLG
ASSQRLSDVG LERQLDGSLV INTAKLSAAA NNGTTLQQLF TNDNKDPLTN GFALKFRDLG
RGVASSGGSV KNKAEALQKN LDNNTKEQTK VNDRAALFET RLRKQYSALD AQMAQLNALN
AYVTQQVATW NKSTA