| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0603 |
|---|
| Symbol | |
|---|
| ID | 3963921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 627755 |
|---|
| End bp | 629530 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637915433 |
|---|
| Product | phosphoenolpyruvate-protein phosphotransferase |
|---|
| Protein accession | YP_521885 |
|---|
| Protein GI | 89899414 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
|---|
| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACATTTT CCATTCACGG ACTCGCCGTT GCGCGCGGCA TCGCCATTGG GCGGGCGGTG
CTGGTGGCCT CCAGTCGGGT GGATGTGGCG CATTATTTTA TTGCGGCCAC TGAGGTTGAT
GCCGAGATTG AACGGGTGCG TAGCGCGCGC GACGCGGTGG TGAATGAAAT TCACCGCCTG
CAGGCCAGCA TCAGCCATAT GGGCCCGAAA GAAGCGCCGC AGGAACTGAC AGCGCTGCTC
GATGTTCATC TGATGCTGCT CAACGACGAT GAACTGTCAA ACGGCGTCAG GCACTGGATC
AAGGACCGCT TGTACAACGC CGAGTGGGCG CTCACCACGC AATTGGAAGT GATTGCCCGC
CAGTTCGACG AGATGGAGGA CGAATACCTG CGCGGACGCA AAGCCGATCT GGAGCAAATC
ACCGAAAAAG TATTACGCGC CATGAAGGGC GTGGCCTCGC CCGTGGTGGT GGCGCCCAGC
CGAACGCTGC GCAAGCCCTC GCAACAAGAC CTCTTGCTCG ACGACACCGT GGATGTGCCC
TTGATTCTGG TGGCGCACGA CCTGTCGCCG GCCGACATGC TGCAGTTCAA GCAAAGTGTG
TTTGCCGGCT TTGTGACCGA CGTCGGCGGC AAAACCTCGC ACACCGCCAT CGTCGCCCGC
AGCCTGGATA TCCCGGCGGT GGTGGGCGCA CGCTTGTCGA GCCAATTGGT GCGCCAGGAT
GACTGGGTCA TCATCGACGG CGACGCCGGT GTGTTGGTGG TCGATCCGTC TCCCATCGTG
CTGGCCGAAT ATGGTTTCAA GCAGCGCCAG GGCGAGTTGG AGCGCGGTCG CTTGACCCGC
CTGCTGCACA CCCCGGCCGT GACGATGGAT GGCCAGAAAA TTGAATTGCT GGCCAATATC
GAGATGCCGG AGGACGCACT TGGCGCTGTG TTGGCGGGTG CGGTCGGCGT GGGCCTGTTT
CGCAGTGAAT TCCTGTTCAT GGGACGCAAT GGCCGACTGC CCAACGAAGA GGAGCAGTAC
CTGGCGTACC GGCGTGCCGT TGAGGGCATG CAGGGCTTGC CGGTGACGAT TCGCACCGTC
GATGTGGGCG CCGACAAGCC GCTGGATGAG TCGCAGCAGG ATAACGCTCA CCTGAATCCG
GCGCTGGGGC TGCGGGCCAT TCGCTGGAGC CTGGCGGACC CGGCGATGTT CCTGACGCAG
TTAAGGGCGA TTCTGCGTGC TGCCGCCCAT GGCCCGGTGA ACCTGCTGAT ACCGATGCTG
GTGCATGCCG GTGAAATTCG CCACACGATG GCCATGATTG ACCGCGCCCG TGTCGAACTC
GACAACCGCG GTATTGCCTA CGGCCCGGTC AAGATAGGCG CCATGATCGA GGTGCCTGCC
GCCGCTCTCA TTGTCAAGGT GTTCCTGAAA TACTTCGATT TTCTGTCCAT TGGCACCAAC
GACCTGATTC AATACACGCT GGCGATCGAT CGCACGGACG AGTCCGTCGC GCATTTGTAC
GACCCCCTGC ATCCGGCCGT GCTGCGGCTG GTGGCACAGA CCATTGCCGA ATGCCGGGCC
CAGGGCAAAC CCGTGAGCCT GTGTGGCGAG ATGGCCGGCG ACGTCTCCCT CACCCGCCTG
CTGCTGGGTA TGGGCTTGCG CAGTTTTTCC ATGCATCCGG CGCAAATTCT GGCCGTCAAG
CAAGAGGTAT TACGCGCCGA CGCGGGCAAG CTGACGGCGT GGGCGCAACA GGTGATGGCC
GACGACGAGC CGGGTTTGCG CATGACCCGG CACTAG
|
|---|
| Protein sequence | MTFSIHGLAV ARGIAIGRAV LVASSRVDVA HYFIAATEVD AEIERVRSAR DAVVNEIHRL
QASISHMGPK EAPQELTALL DVHLMLLNDD ELSNGVRHWI KDRLYNAEWA LTTQLEVIAR
QFDEMEDEYL RGRKADLEQI TEKVLRAMKG VASPVVVAPS RTLRKPSQQD LLLDDTVDVP
LILVAHDLSP ADMLQFKQSV FAGFVTDVGG KTSHTAIVAR SLDIPAVVGA RLSSQLVRQD
DWVIIDGDAG VLVVDPSPIV LAEYGFKQRQ GELERGRLTR LLHTPAVTMD GQKIELLANI
EMPEDALGAV LAGAVGVGLF RSEFLFMGRN GRLPNEEEQY LAYRRAVEGM QGLPVTIRTV
DVGADKPLDE SQQDNAHLNP ALGLRAIRWS LADPAMFLTQ LRAILRAAAH GPVNLLIPML
VHAGEIRHTM AMIDRARVEL DNRGIAYGPV KIGAMIEVPA AALIVKVFLK YFDFLSIGTN
DLIQYTLAID RTDESVAHLY DPLHPAVLRL VAQTIAECRA QGKPVSLCGE MAGDVSLTRL
LLGMGLRSFS MHPAQILAVK QEVLRADAGK LTAWAQQVMA DDEPGLRMTR H
|
|---|
| |