Gene Rfer_0556 details

Gene Information

• Locus tag: Rfer_0556
• ID: 3960744
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 580958
• End bp: 581557
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637915386
• Product: flagellar basal body-associated protein FliL
• Protein accession: YP_521838
• Protein GI: 89899367
• COG category: [N] Cell motility
• COG ID: [COG1580] Flagellar basal body-associated protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.521306
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCGACCA AACCTGACGC AGCCAAGCCC GACGCCGTCA AACTTGACGC GGACGAGCCA 
GGCAAAAAGC CAGTCTGGCG CAAAAAAATG CTGATCATCG TCATTGCCGG GGTGATGGTC 
CTGGTTTCAG CGGGTGGAGG TGCGTTTTTC TTCATCAGCA AGAAGCGTGC TGCTGCTGCC 
GTGGAGGGCA CAGGCGGCGC GTCAGCAGTT GCTGTAGAAG CAGCACCAAA AGGGCCGCCG 
GTTTACTTGC CACTGGACAA TATGGTGGTG AATCTGGCTG ACCCGGGGGG TGAGAAGGTG 
GCGCAGGTGG GTATTACCCT GCAAGTGGTC GATGCTCACG CTTCGGAGTC AGTCAAAGCC 
TATTTGCCGT CTATCCGCAG TGGTGTTCTG ATGCTGATTT CGCAGCGAAC GGCCGCAGAG 
CTTTTGACGC AAGAGGGCAA GCAAAAGCTG GCCAAGGATA TTTGGCGTGA AACCCTGATT 
CCGTTTGGCG GTGGCGAAGC AGGTGCGGCC CCGGCTGGCG TCAAGAAGAA AGCTGCCAAG 
GCGGCTCAAG CTGAACTGCC GGTGGTGGGC GTGTTGTTTT CCAGCTTCAT TGTTCAGTAG 

 

Protein sequence

MATKPDAAKP DAVKLDADEP GKKPVWRKKM LIIVIAGVMV LVSAGGGAFF FISKKRAAAA 
VEGTGGASAV AVEAAPKGPP VYLPLDNMVV NLADPGGEKV AQVGITLQVV DAHASESVKA 
YLPSIRSGVL MLISQRTAAE LLTQEGKQKL AKDIWRETLI PFGGGEAGAA PAGVKKKAAK 
AAQAELPVVG VLFSSFIVQ