| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0550 |
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| Symbol | |
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| ID | 3960738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 574319 |
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| End bp | 576085 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915380 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_521832 |
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| Protein GI | 89899361 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCGC AGCCGGGTCG AATAATCGTC AGCATCGGTG GTGCAAAATT GCCCCACACT
GACCTGGAAA CCCTTGGAAA CCCTATGTCT GCCGCCCCCG CCATCGCTAT CAACCCCACG
CTGTCACAGC GTTTTTCCGG TCTGGACCAA GGTCAGCGGC TGCGCATGGG CTTGGGGCTG
GTCGTGTTTG TTGCCATTGG CATCATCGGG CTGATGATGG GGCGCCAGGC CGAGTGGCGC
GTCTTGTATG CCAATCTGGC TGACAAAGAC GGCGGCGCCA TCGTGGCCCA GTTGACAACC
ATGAACGTTC CGTACAAGTA TGCCGATGGC GGGGGCGCGA TCCTGGTGCC GGCCGACAAG
GTTTATGACA CGCGTTTGCG ACTTGCCTCG CAGGGCTTGC CCAAGGGGGC GGTCGCCGGC
TTCGAGACGA TGGATGCCAA CCGTTTTGGC ATGACGCAAT TTCAGGAGCG GCTGGCGTTT
CAGCGCGGCC TGGAGGGTGA GCTGACGCGC TCGATCCAGG CGCTGTCCTC GGTGCAGAGC
GCCCGCGTTC ATTTGGCCTT GCCGAATCAA AACGGATTCT TTCGTGAGCA GCAAAAGCCG
TCGGCCTCGG TGCTGGTCAG TCTGAACGCC GGGCGCACGC TGGACCGGGC GCAGTTGGCG
GGCATCGTGC ATCTGGTGTC GTCCAGTGTG CCCGAGATGA ACGCCAGCGC TGTGAGCGTG
CTCGACGATT CCGGCAAGTT GCTGTCGACC CCGCCCGAGG GCGCGGACGG CGCCGGTGGT
GGCGACGCAC AGCAGTTGCA GTATGTGCAG CAACTCGAGC AGCTCTACAG TCGCCGTATT
CTGGACATTC TGGAGCCGGT CGTGGGCCGG GGCAACGCGC GAGCGCAGGT GACGGCCGAG
CTTGATTTCT CACAGACTGA ATCCACCTCG GAGTCGCACA AGCCCAATCA GACGCCCGAT
TCAAGCGCGA TTCGCAGCCA GCAGGTATCC GAGAGCAGCA ACGGCAGTGG CATCAGTGGG
CCTCCTTCGG GGGTACCGGG TGCGACCAGC AACAAGCCGC CCGGACCGTC TTCGGCGCCC
ATCAACGGTG CACCACAAAC CTTGACCGCG GCGGGTGCCG GCGCCAGTGC CGGTGCCGGG
GGTCGACGTG AATCCATCAT CAACTACGAG GTGGACAAGA CGGTCAAGGT CGTGCGCGGC
GGCACCGGCA TCGTCAAGCG CATCAGTGCC GCCGTGGTGG TCAACCACCA GTCGGTGACC
GATGCCAAAG GCAAAACCAC CACCACGCCT TTGAGCGCGC AGCAGATCGA GCAAATGACG
GCCTTGGTAC GCGAAACCGT CGGCTTCAAC AAAGAGCGGG GCGATTCGGT GAACCTGATG
AATGCGCCGT TCACCACGGA AAGAGTGGTG CCTGTGGACT TGCCATTCTG GAAGCAGTCC
GAAATTCAGG ATTTGGCGCG CAGCTTGGCC TGGCCACTGG GCACTTTGTT GTTCGGCGCT
TTGGTGCTGC TCGGGGTGAT TCGCCCGGCG CTCAAGACCT TGGCACAGTC GCAGCCGAGA
ATCTCGGCTT CATCCCACCA GTTGAATGCG ATTGAGTCCG AGGCGCCAGA GCGGGCGCAG
TTGGCGGCCC CCGCCAGAAG CAGTGAGCTT GCCGGCCCCA CCAGCGGTGA ACTGGCCTTG
GATGATGCCC GCAAGTTGAC GCGCGACAAC CCGGCGGCGG TGGCCAATAT CGTCAAGACC
TGGATCAATG GTGAGGCGCC GGCCTGA
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| Protein sequence | MFSQPGRIIV SIGGAKLPHT DLETLGNPMS AAPAIAINPT LSQRFSGLDQ GQRLRMGLGL
VVFVAIGIIG LMMGRQAEWR VLYANLADKD GGAIVAQLTT MNVPYKYADG GGAILVPADK
VYDTRLRLAS QGLPKGAVAG FETMDANRFG MTQFQERLAF QRGLEGELTR SIQALSSVQS
ARVHLALPNQ NGFFREQQKP SASVLVSLNA GRTLDRAQLA GIVHLVSSSV PEMNASAVSV
LDDSGKLLST PPEGADGAGG GDAQQLQYVQ QLEQLYSRRI LDILEPVVGR GNARAQVTAE
LDFSQTESTS ESHKPNQTPD SSAIRSQQVS ESSNGSGISG PPSGVPGATS NKPPGPSSAP
INGAPQTLTA AGAGASAGAG GRRESIINYE VDKTVKVVRG GTGIVKRISA AVVVNHQSVT
DAKGKTTTTP LSAQQIEQMT ALVRETVGFN KERGDSVNLM NAPFTTERVV PVDLPFWKQS
EIQDLARSLA WPLGTLLFGA LVLLGVIRPA LKTLAQSQPR ISASSHQLNA IESEAPERAQ
LAAPARSSEL AGPTSGELAL DDARKLTRDN PAAVANIVKT WINGEAPA
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