| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0524 |
|---|
| Symbol | |
|---|
| ID | 3963863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 547372 |
|---|
| End bp | 548217 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637915355 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_521807 |
|---|
| Protein GI | 89899336 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCA ATCCGAAAAA TCTCGTCCTC GATCTCATGC TGGCGACCGG CGACAAGCCG
ATGGCCGCCC GCGATGCGAT CCTGGCGGGC GCCCTTTTCA ATATCAGCGA AAACAGCCTG
CGCGTCACCC TGGCGCGCCT GTCGGCGGCG GGTCTGATTG AGGCGGCAGA GCGCGGCGCT
TACCGCCTTG GGCCCGCGGC CACCGATTTG GCCGGCGAGG TGGCCACCTG GCGCACGATG
GAATCCCGGC TACGGGCGTG GCAAGGCAGC CATATCGTCG TCCATTGCGG CGCGCTGGGG
CGCAGCGACC GCGCCGCCCC GCAGCGGCGT GAACGCGCCC TGCAGATGAT GGGCTTGCGG
CTGTTGGAGC GTGGTCTGTA TATTCGTCCC GACAACATTG AGTCGGATCT TGACGAGGTG
CGCCAACGTC TCTTCAAACT TGGACTGGAC CACAATGCGG CTGTTTTTCG GGCCAGTGGC
CTCGACCCGG CGCGTGAGGC CGTCGTGCAC CAGCTGTGGA ACGGCCAGGC GCTGACGCGA
ACCTACCGGC AGTTGCGCGC CGAGCTGGAG GCGTGGCTGG CCCGCGCGAA CCAACTTCCG
CTGGATGCAG CGGCGCGCGA ATCGTTCCTT CTGGGCGGCA AAGCCATTCA TCAATTGGTC
TTTGATCCGC TGCTACCGGA GCCGTTTGTC GACACCCGAG AGCGCCACGC GTTCATCCAG
GCCGTGCACC ATTTTGACGA AGCGGGTCGT GCCATCTGGA ACCGTTTTTT TGCATCCGTC
GCGGACACCC CACCCGCTCT TCATCTCACC CCTCAACCCG CCGAACTGGA GACGATTAAT
GAATAG
|
|---|
| Protein sequence | MKVNPKNLVL DLMLATGDKP MAARDAILAG ALFNISENSL RVTLARLSAA GLIEAAERGA
YRLGPAATDL AGEVATWRTM ESRLRAWQGS HIVVHCGALG RSDRAAPQRR ERALQMMGLR
LLERGLYIRP DNIESDLDEV RQRLFKLGLD HNAAVFRASG LDPAREAVVH QLWNGQALTR
TYRQLRAELE AWLARANQLP LDAAARESFL LGGKAIHQLV FDPLLPEPFV DTRERHAFIQ
AVHHFDEAGR AIWNRFFASV ADTPPALHLT PQPAELETIN E
|
|---|
| |