| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0482 |
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| Symbol | |
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| ID | 3963801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 499016 |
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| End bp | 500074 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637915313 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_521765 |
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| Protein GI | 89899294 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTCC CCTCGGCCTT TGAAAACCTG AACGTGCTGT CCCAGCACAC CTTGCTCTCG
CCGGCCCAGT TGCACGACGA TGTGCCCGCC AGCGTGCGCG CCACCCAGAC GGTCACCACG
GCACGCCAGG CGGTGGCCAG TATTCTGAGC GGACGCGACC CGCGTTTGCT GGTGGTGGTG
GGGCCCTGCT CGATCCACGA CATTGCCGCG GCAAAGGATT ACGCGCAGCG CCTCAAAGCG
CTGGCCGATG AGCTGGCCGA CCAACTGTTC ATCGTGATGC GCGTGTACTT TGAAAAACCG
CGCACCACGG TCGGCTGGAA GGGCTTGATC AACGACCCGC ACATGGACGA CTCGTTTGAC
ATCGAAGAAG GCCTGCACAT CGCGCGGCGC CTGCTGGTGG AGCTCAATGA CATGGGCCTG
CCCTGCGGCA CCGAGGCGCT GGACCCGATC ACGCCGCAGT ACCTGGGCGA CCTGATCGCC
TGGAGCGCAA TCGGCGCGCG CACCACCGAG AGCCAGACGC ACCGTGAAAT GGCCAGCGGC
CTGTCGAGCC CGGTCGGCTT CAAGAACGGC ACCGACGGTG ACCTGGACGT TGCCTTGAAC
GGTATGTTGT CGGCAGCGCA GCCGCATGCG TTTCTGGGTA TCAATGGTGA CGGTCAGGTG
GCGCTGACGC AGACGCGCGG CAATGCGTTT GGCCATTTGA TCCTGCGCGG CGGTGCCGTG
CCCAACTACG ACTCGGTGGC GGTGGCGCAA GCCGAGGCCG CGCTTAGGGC GGCCAAGTTG
CCGGTCAACA TCGTGGTCGA TTGCAGCCAT GCCAACTCGC GCAAAAACCA TGCGCTGCAA
ACGCTGGTGC TCAAAGACGT GGTCGGGCAA ATCCTGGACG GCAACCGTTC GATCAAGGGC
GTGATGCTCG AATCCAACCT GTTCGAAGGT AACCAAAAGC TGGCGCGCCC GCAAGACTTG
CGCTACGGCG TCTCCATCAC CGACGCCTGC CTGGGCTGGG ACAGCACCGC CGCCAGCCTG
CGCGAGGCCG CGGAACGCCT GCGCACGATG CCGCGTTGA
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| Protein sequence | MTFPSAFENL NVLSQHTLLS PAQLHDDVPA SVRATQTVTT ARQAVASILS GRDPRLLVVV
GPCSIHDIAA AKDYAQRLKA LADELADQLF IVMRVYFEKP RTTVGWKGLI NDPHMDDSFD
IEEGLHIARR LLVELNDMGL PCGTEALDPI TPQYLGDLIA WSAIGARTTE SQTHREMASG
LSSPVGFKNG TDGDLDVALN GMLSAAQPHA FLGINGDGQV ALTQTRGNAF GHLILRGGAV
PNYDSVAVAQ AEAALRAAKL PVNIVVDCSH ANSRKNHALQ TLVLKDVVGQ ILDGNRSIKG
VMLESNLFEG NQKLARPQDL RYGVSITDAC LGWDSTAASL REAAERLRTM PR
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