| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0477 |
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| Symbol | |
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| ID | 3963796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 492997 |
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| End bp | 494610 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637915308 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_521760 |
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| Protein GI | 89899289 |
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| COG category | [T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
[COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTTT CACTCCCGCA AGCCAACACC TTGATCATTG ACGATTTCCA GGGCATGCGC
ACCATGCTGC GGGACTTCGT CCGGCTCATG GGCGTCACCC GAATCGACAC CGCCAGCAAT
GGCCATGAGG CCATCAACCA GCTCAGCGCC AACAAATATG ACATTGTTAT TTGTGATTAC
AACCTCGGGC CTGGCGCCAA CGGGCAGCAG GTGCTGGAGG AGGCCAAGCT GCGCAATTTT
GTCGGCGTGT CCACCATCTG GGTCATGGTC ACGGCCGAAA AAACAACCGA CATGGTGATG
GGGGCGGCGG AGGTCAAGCC CGACGACTAT CTGCTCAAAC CGATCAACCA GGTGCTGCTG
CAAAGCCGTC TGGAAAAATT GATCACGCGC AAGCAGTCGC TCGGTGCGAT CGAGGCTGCC
ATCCGGACGC AGGACTACAG CGCTGCCATC GCTCTGTGCG ATCAGCAGCT GAATGCGCGC
GCGGTCAATC CGCAGGAAGT TTTGCGCATC AAGAGCGACT TGCTGCTGAC CCTGGGCGAC
TACCCGGCCG CGCGGACACT GTTCGAGTCG GTGCTGGCAT TGCGCAGTGT GGCGTGGGCC
AAGACCGGCC TGGGCAAGGT CTTGTTTTAC GGCCAGGACT ATGCCGGTGC GGTGCAATTG
TTTCAGCAGG TGCTGCAGGA AAACCGGATG TACATGGAGG CGGCCGACTG GCTGGCCAAG
ACCCTCGACG CGATGGGGGA CAGCGCGCAG GCCCAGCAAG TACTGGAGGA CGCGGTGCAA
CTGTCGCCCA ACTCGCCGAT CCGCCAAAAG ACCCTCGGCG ACACGGCCTA CCGCAATGGC
GCGCTCGATG TGGCGCAGGC GGCGTTCGAG AAGACCATCA AGATCAGCGA ATTTTCGCCG
CACAAGAACC CGGCGGTGTA CGCCCGGCTG GCGCGGGTCT TCTCGGACCA GGACTCCCCT
GAAGAAGCGC TGAACATCCT CAAACGCAGC AAAGCCGACT TCCGATACAA CCCGGCCGCC
GCCCTGCAAA CGGCGGCGGC CGAAAGCCTG GTCTATCAAA AAATGGGGCA GGTGCAGAAA
GCCGAAGCGG CCATGCTGGA TGCCGAGCGA CTGATGGAAC AACTGGCCGA CAAGGTGAGC
CCCGAGATGA CGATGGAGGT GGCCAAAGCG CTGTTCAAAC TGGGAAAAAA GGACAAGGCA
TGCGGCTTGC TCCGGGACCT GGTCAAAAAC AACCATGAAG ACGGCGAACT CTCCAGGCAG
ATCGGCGCCG TCTTTGAGGG CGAAAACATG GCGGAAGAGG GCCAGACCCT CATCAAGGCC
TCGCGCAATG AAGTCATCGA CATCAACAAC CAGGGCGTCA CGCTGGCCAA GCAAGGCGAC
TTCCAGCAAG CGGTCAAACT ATTGCGAACT GCCGCGCAGC AGCTGCCCCA TAACGAAGTG
ATCAGCGTGA ACCTGTGCGG CTTGCTGATT GGCCTGATGC AACAAAAAGG CAAGACCGAG
GACCTGGTTC TTGAAACCAG AGAGCTGCTC GGCCGGGTGC GCGAAATGAA CCCGGTCAAC
CAGAAATACC GCGCCTATGC GCTCGCGCTG GCCCGTCTGA CGAACGAGCA CTAG
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| Protein sequence | MTFSLPQANT LIIDDFQGMR TMLRDFVRLM GVTRIDTASN GHEAINQLSA NKYDIVICDY
NLGPGANGQQ VLEEAKLRNF VGVSTIWVMV TAEKTTDMVM GAAEVKPDDY LLKPINQVLL
QSRLEKLITR KQSLGAIEAA IRTQDYSAAI ALCDQQLNAR AVNPQEVLRI KSDLLLTLGD
YPAARTLFES VLALRSVAWA KTGLGKVLFY GQDYAGAVQL FQQVLQENRM YMEAADWLAK
TLDAMGDSAQ AQQVLEDAVQ LSPNSPIRQK TLGDTAYRNG ALDVAQAAFE KTIKISEFSP
HKNPAVYARL ARVFSDQDSP EEALNILKRS KADFRYNPAA ALQTAAAESL VYQKMGQVQK
AEAAMLDAER LMEQLADKVS PEMTMEVAKA LFKLGKKDKA CGLLRDLVKN NHEDGELSRQ
IGAVFEGENM AEEGQTLIKA SRNEVIDINN QGVTLAKQGD FQQAVKLLRT AAQQLPHNEV
ISVNLCGLLI GLMQQKGKTE DLVLETRELL GRVREMNPVN QKYRAYALAL ARLTNEH
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